Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0433 ATGGCGTTGAAGGAAAATCACAAAAAAGAGAATTTTTCAAGCGATGATGATTCATCTCCAAGAGGGGTATTGGAGACCCCGGTTTCAGGAACAGAGTCAGATAACAGTGACCGTTCCGTTTTTTTATCGGAGAGTTCACCGTCAGCGGAAACGGCGGATACACGGCGAGTGGGTGGATTTGAAGGGCACATGCAGCAATGGAAGTCAATGATTGACGTTTTGACGTTTAAGTCTGTTAGAAAATTAACGGCTTTTCCTCTGCTTTCAGCGAACAATGATGTTTCGAAGAAAGGGTTGACGAAGAAACTTTCTCGTATTCGAAGCGCAGAAGATACAATTGATATTGGAGCTATTCCCACGAAGCCTTCTTGGAGAAACTTCGATTATGCAGAGCTTGCAGCAGCTACTAACGATTTCAGTGACGAGAACATGATTGGGAAAGGTGGTCATGCTGAAGTGTATAGGGGATACCTACCAGATGGTCAAGTTATAGCAGTAAAGAGGCTAATGAAGAATGAAAAGGATCCGGGGGATAGAGCTGGTGATTTTTTATCGGAGCTTGGGATTATTGCACACATAAACCACTATAATGCAACACACCTTGTTGGTTTTGGAGTAGAGCGTGGCCTCTACTTTGTCCTACAATTTGCTCCACATGGCAGTCTCTCTTCTATGCTTTTTGGTTCTGAATGCTTTGAGTGGAAGAAAAGGTTCAAGGTAGCTCTTGGGGTAGCAGAAGGGTTATTGTATCTCCATCAAGATTGCCCAAGAAGAATCATTCATAGAGACATTAAAGCCTCAAACATACTACTCAATGACAATTATGAAGCTGAGATTTCAGATTTTGGACTAGCAAAGTGGCTCCCGGGTAAGTGGTCACACCACGTTGTCTTCCCAATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTATTTTATGCATGGAGTTGTGGATGAGAAGACGGATGTATTCGCGTTTGGGGTTTTGCTGTTGGAGCTTATAACAGGCCGCCATGCAGTTGATTCTAATAGTAGGCAAAGTCTTGTGATCTGGGCCAAGCCACTGCTTGAAACAAACAACATCAAAGAAATAGCAGACCCCAGGTTAGGAGAGGAATATGATCCTACTGAAATGAACCTTGTCATGGTAACAGCTTCCATGTGTATCCACCATGTATCCTCGATGCGACCGTACATGAATCACGTTGTGAAGTTGCTGAAGGGTGAAGCACCTATAGAGCTTAAACAGAGTTCAGGACAATCAAAATCACTATTGTTAGAGGCATGTGACCTTGAAGATTATACTTGTTCTAATTACTTGAAGGACCTAAACCGCCACAAGCAATTACTCATGGAGTGA 1359 0.4319 MALKENHKKENFSSDDDSSPRGVLETPVSGTESDNSDRSVFLSESSPSAETADTRRVGGFEGHMQQWKSMIDVLTFKSVRKLTAFPLLSANNDVSKKGLTKKLSRIRSAEDTIDIGAIPTKPSWRNFDYAELAAATNDFSDENMIGKGGHAEVYRGYLPDGQVIAVKRLMKNEKDPGDRAGDFLSELGIIAHINHYNATHLVGFGVERGLYFVLQFAPHGSLSSMLFGSECFEWKKRFKVALGVAEGLLYLHQDCPRRIIHRDIKASNILLNDNYEAEISDFGLAKWLPGKWSHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLELITGRHAVDSNSRQSLVIWAKPLLETNNIKEIADPRLGEEYDPTEMNLVMVTASMCIHHVSSMRPYMNHVVKLLKGEAPIELKQSSGQSKSLLLEACDLEDYTCSNYLKDLNRHKQLLME 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0433 452 MobiDBLite consensus disorder prediction 1 57 - -
Lal15g0433 452 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 4 452 - -
Lal15g0433 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lal15g0433 452 SMART serkin_6 139 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0433 452 Gene3D Phosphorylase Kinase; domain 1 100 214 - -
Lal15g0433 452 SUPERFAMILY Protein kinase-like (PK-like) 123 417 IPR011009 -
Lal15g0433 452 Pfam Protein kinase domain 140 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0433 452 ProSiteProfiles Protein kinase domain profile. 139 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0433 452 MobiDBLite consensus disorder prediction 17 52 - -
Lal15g0433 452 Gene3D Transferase(Phosphotransferase) domain 1 218 424 - -
Lal15g0433 452 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Lal15g0433 452 PANTHER OS08G0249100 PROTEIN 4 452 - -
Lal15g0433 452 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0433 Lal-Chr15 2960126 2965638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0433 127 402 Trihelix Transcription Factor Family AT1G68690 45.455 2.21e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal15g0433 Pkinase 4.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0433 - - gmx:100818314 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0433 15 2960126 2965638 Lal16g1696 16 15944381 15949272 PCT
Lal16g1696 16 15944381 15949272 Lal15g0433 15 2960126 2965638 PCT