Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0407 ATGGGTGCAGGAGGACCTGATGATGATGATAATAGGTGGCCACCATGGTTGAAGCCACTGCTGAAAGAGACTTTCTTTGTTCAATGCAAGCAGCATGCTGATTCACACAAGAGTGAATGTAACATGTATTGCTTGGATTGTATGAATGGTGCTCTCTGTTCTCTCTGCCTTACCCATCACAAAGAACATCGTGCTATTCAGATTAGGAGGTCCTCGTATCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATAACTGGTGTTCAGACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAAAGGCCTCAACCAAGGCCTGGAAAAGGTGTCACAAACACGTGTGAAGTTTGTGAACGTAGCCTTCTTGATTCTTACAGGTTTTGTTCTCTTGGTTGCAAGATTGCTGGAACATCTAAGAATTTCCAGAAAAAAAAGCACACAGCAACAATGGCATCAGATTCTGAAGATTCATACTGTAGCAGCAGCAGCCATGGCAGGCACATAAACTCAAAGGTGCAGAGTTTCACACCATCAACACCACCACCAACTTCAGTTAATTACAGAACAGCAAAGAGAAGAAAAGGAATACCACACCGTGCTCCAATGGGAGGACTAATCATACAATATTAG 648 0.429 MGAGGPDDDDNRWPPWLKPLLKETFFVQCKQHADSHKSECNMYCLDCMNGALCSLCLTHHKEHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIAGTSKNFQKKKHTATMASDSEDSYCSSSSHGRHINSKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIQY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0407 215 MobiDBLite consensus disorder prediction 159 192 - -
Lal15g0407 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 211 - -
Lal15g0407 215 MobiDBLite consensus disorder prediction 159 204 - -
Lal15g0407 215 Pfam PLATZ transcription factor 69 140 IPR006734 -
Lal15g0407 215 PANTHER - 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0407 Lal-Chr15 2756520 2758985 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal15g0407 PLATZ 5.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0407 - - vra:106774881 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0407 15 2756520 2758985 Lal15g0407 15 2756520 2758985 ECH
Lal16g0463 16 2868183 2870597 Lal15g0407 15 2756520 2758985 LSH
Lal15g0407 15 2756520 2758985 Lal23g1121 23 12768713 12771232 LSH