Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0404 ATGTCTTCAACAAAAGCAGATGATTCAGAATCTCCACCATCTTCATCATATAACAGCCCACCAACGCTTATAGCTCTTGCCCTAGCCTTGGTTGTGGTGTGTTTTGTTGGTTTCAGCATTGTGTACTTTTGCAGGTGTTATTTAACTAGCATTTTCAACGCTTGGGCCATTCAACGTTCAACCTCACTTGGTGGCTCCCTTGTTAACAATGTTTCTTCTTCTCCCAATAGAGGTCTTGACCCTTCTGTGCTTCATACTTTCCCTACATTTCCCTATTCCACTGTTAAGGATCTTCGAAAAGAGAAGTATAGCCTCGAATGTGCAATATGTTTGCTTGAATTCGAGGATGATAGCGTGCTGCGTTTGTTAACCGTTTGTTGCCATGTTTTTCATCAAGAATGCATTGACCTATGGCTTTGTTCTAACAAGACATGCCCCGTTTGCCGTAAAGAACTTGATTCAGCAATCGTTGAGGCGCGAAATTCTCAGGAACGAGGTGAGGATAATAATGCTGATGTTGAACAAGATAGGAGGGATGATGTGTGCATTGATGTAAAAGAAAGCGAAGATCATCATAAACATAGTAGCAATGATGATAATGAAGAGCCTCAAACACATAAAGAACACATGTTTTCAAAATCACACTCAACGGGGCATTCTATAGTTATGATTAGAGGAGAAGATGAAGGAAATGATAATGATAAATATAAGTTGAGATTACCAGAACATGTTGCAGTACTAAAAATTATAGGAGGTGGTGGCCACAACCATTCAAAGAGTTGTTCAAGTTACAAAGATGTGACAAGACATGTTGCACCTTGTAGTAATTGTGGTTATGTTGAAACTGTATCTGGTTGCTCTTCTAGTAAGGGTAATCAAAATGTTTAA 888 0.3919 MSSTKADDSESPPSSSYNSPPTLIALALALVVVCFVGFSIVYFCRCYLTSIFNAWAIQRSTSLGGSLVNNVSSSPNRGLDPSVLHTFPTFPYSTVKDLRKEKYSLECAICLLEFEDDSVLRLLTVCCHVFHQECIDLWLCSNKTCPVCRKELDSAIVEARNSQERGEDNNADVEQDRRDDVCIDVKESEDHHKHSSNDDNEEPQTHKEHMFSKSHSTGHSIVMIRGEDEGNDNDKYKLRLPEHVAVLKIIGGGGHNHSKSCSSYKDVTRHVAPCSNCGYVETVSGCSSSKGNQNV 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0404 295 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Lal15g0404 295 MobiDBLite consensus disorder prediction 187 214 - -
Lal15g0404 295 Pfam Ring finger domain 106 149 IPR001841 -
Lal15g0404 295 SMART ring_2 107 148 IPR001841 -
Lal15g0404 295 CDD RING-H2_EL5_like 106 149 - -
Lal15g0404 295 PANTHER RING-H2 FINGER PROTEIN ATL29 6 267 - -
Lal15g0404 295 MobiDBLite consensus disorder prediction 187 217 - -
Lal15g0404 295 PANTHER RING FINGER DOMAIN-CONTAINING 6 267 - -
Lal15g0404 295 SUPERFAMILY RING/U-box 106 154 - -
Lal15g0404 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 156 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0404 Lal-Chr15 2740079 2740966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0404 1 244 Rapid Response to Elicitors AT3G05200 36.220 7.02e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0404 - - ccaj:109800443 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0455 16 2825675 2826680 Lal15g0404 15 2740079 2740966 LSH