Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0395 ATGACATTGGTTATCAGAGAGAGAAGGCACCAACAAGCTCTAAGGCTTTCATTACCACCACCTTCACATGATCACTTATGTCACCAAATCCATCTACCAGCATTGTTGCCATCAAAATCTACCCATGCAAATTCTTCTCCAGGGATCAGGAACCTTTCTGATCTTAAGAAAGTTGCAGTTCTTGGCCATGGTAATGATGGCACAGTTTATAAAGTTCGTCACAAGAAGAACCATTCCTTCTATGCATTGAAAGTCCTAAGATTCAATCAGAATGGCATTGACATCATTCAACCTGCTATGGTACTTGAGGCTGAGATTCTTAAACGTGTGAATTCTCCATATATAGTAAAGTGCCATGCAGTTTTTGACCATGGTACATGTGAAGCTGACAATGGAGGCGACCTTAACTTTGTTATGGAATACATGGAAGGAGGGTCGCTGCATGATGTGTTGACAGAACATCATAGACTACCCGAGGAAGCGATTTCTGTGTTGGCCAAGCGGGTGTTTGAAGGACTCGACTATTTACATGGCATGCACATTGTGCATAGAGATATAAAACCTTCAAACTTGCTTGTGAATGATAAAGGGGAGGTAAAGATTGCAGATTTTGGAGTTAGTCATGTAGTAGAAGGAAGGTTTGATGCAAGTGAGTTAAATGCAGGTACATGTGCTTACATGAGCCCAGAGAGAGTTGATCCTGAAAGGTGGGGTGGTGAAGATGTAGATGAGTTTGCAGGAGATGTGTGGTCAATGGGAGTGGTAATGTTGGAGTGCTTTTTAGGCTATTTTCCCTTGGTTGGTCCAGGGCAAAGACCAGATTGGGCAACATTGATGTGTGCAATTTGCTTTGGTGAGAAGCTAGAAATGCCAGAGAAAGCATCACCTGAGTTTCAAAATTTTGTTAGGAGATGTTTAGAGAAGGATTGGAGGAAGAGAGCAACAGTGAAAGAGCTTCTTCACCACCCTTTCGTGAATAGAATGCAATAG 990 0.4222 MTLVIRERRHQQALRLSLPPPSHDHLCHQIHLPALLPSKSTHANSSPGIRNLSDLKKVAVLGHGNDGTVYKVRHKKNHSFYALKVLRFNQNGIDIIQPAMVLEAEILKRVNSPYIVKCHAVFDHGTCEADNGGDLNFVMEYMEGGSLHDVLTEHHRLPEEAISVLAKRVFEGLDYLHGMHIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFDASELNAGTCAYMSPERVDPERWGGEDVDEFAGDVWSMGVVMLECFLGYFPLVGPGQRPDWATLMCAICFGEKLEMPEKASPEFQNFVRRCLEKDWRKRATVKELLHHPFVNRMQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0395 329 Gene3D Transferase(Phosphotransferase) domain 1 50 329 - -
Lal15g0395 329 SUPERFAMILY Protein kinase-like (PK-like) 53 326 IPR011009 -
Lal15g0395 329 Pfam Protein kinase domain 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0395 329 SMART serkin_6 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0395 329 CDD PKc_MAPKK_plant_like 53 326 - -
Lal15g0395 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Lal15g0395 329 ProSiteProfiles Protein kinase domain profile. 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0395 329 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 327 IPR045269 GO:0004674|GO:0006914
Lal15g0395 329 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 5 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0395 Lal-Chr15 2685612 2686601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0395 1 326 MAP Kinase Kinase Gene Family AT1G32320 53.988 6.63e-111 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lal15g0395 Pkinase 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0395 K20604 - gmx:100817973 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0395 15 2685612 2686601 Lal23g1123 23 12782141 12783184 LSH