Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0389 ATGTATGGGGATTGTCAAGTTATGTCAAATATGGGAGGGAACGTAGTAGTAAACTCAGATTCTCTCTTTTCCTCTTCGATTCAGAACTCTAACTTCAACTTCTTGCCCACCATGCCTTTCCAACCTTTTCCTCCCTTGAAAGAAGAAGATGGGATCTTGGCAGGGAAGGAAGAAATGGAGAGTGGTTCAGGTAGTGAACAAGTTGAAGACAAATCCGGTAATGAACAAGAAGGTGAACAACCTCCAAAGAAAAAACGTTATCACAGGCACACTGCTCTCCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCAGATGACAAGCAAAGGTTGAAACTGAGCCATGAGTTGGGTCTGAAACCACGCCAGGTTAAGTTCTGGTTTCAGAATCGCCGAACCCAGATGAAGGCACAACAAGATCGAGCAGATAATGTGATACTTAGAGCAGAGAATGAGAGTCTAAAGAATGATAACTATAGGCTACAAGCAGCGTTACGTAATATTATATGTCCCAATTGTGGTGGTCCTGGTATCATGGGACCTGATATGGGATTGGATGAACAACAGCTTCGCCTTGAAAATGCTCGCTTAAGAGAAGAGTTAGAACGTGTGTGTTGTCTGACATCAAGATACACCGGGCGCCAAATCCAAACAATGGCACCACCACCTTCTCTTATGGACCCTTCCTTGGATTTAGACATGAGCATATATTCAAGACACTTCACAGATCCTATACCTTGCACCCAAATGATTCCTGTACCAATGATGCCACCTCCTGAAGCCTCATCTTTCCCAGAGGGTGGTCTTTTAATGGAAGAAGAGAAGTCTCTAGCATTGGACCTTGCAGCCTCTTCCATTGATGAGCTTTTGAGAATGTGTCATACACATGAACCACTTTGGATCAGAAGCAGTGAGAATGTAATGGAAGTTCTTAATTTTGAGGAACATGCAAGGATGTTTCCATGGCCTTTGAATCTTAAGCACCGAAGTGAAGTAAGGAGAGAAGCTAGCCGTGACAGTGCTGTGATTATAATGAATAGTGTCACTCTTGTTGATGCCTTCCTTGATGCTCAAAAATGGATGGAGCTGTTTCCCACAATCGTTTCTAGAGCAAAAACGGTGCAAATTATATCTTCTGGTGCTTCTGGTCATGCATGTGGATCTCTTCAGCTGATGTACGCGGAGCTTCAAGTTCTTTCTCCTTTGGTGTCCACTCGTGAGACTCATTTCCTTCGGTATTGTCAACAAAATGCTGAGCAGGGAACCTGGGCCATTGTTGATTTTCCAATTGACACCTTTCATGAAAATTTTCAACCTTCTTATCCTAGATACTGTAGAAGGTGCTCTGGTTGTGTGATTCAAGATATGCCAAATGGGTATTCAAGGGTAACTTGGGTTGAGCATGGAGAAGTAGAAGAGAAACCTGTGCATCAGATATTTGGTAACTATGTTTACAGTGGAATGGCATTTGGAGCACAACGCTGGTTAGGAGTTTTGCAGAGACAATGTGAGAGAGTTGCAAGCCTCATGGCCAGAAATATATCAGATCTTGGAGTGATACCCTCGCCCGAAGCGCGAAAGAATTTGATGAGTCTAGCACAAAGAATGATTCGGACATTTAGCCTTAACATGAGTACCTCGAGTGGTCAGTCATGGACAGCCATATCTGATTCCCCTGAAGACACTGTTAGAATCACAACTAGGAAAATCACAGAGCCTGGTCAGCCTAATGGGGTTATTCTCGGAGCCGTTTCAATGATTTGGCTGCCCTATCCTCACACCAAGGTCTTTGATCTCCTCAGGGATGAACGTCACAGATCTCAGATGGATGCTCTTTCCAATGGGAACTCATTGAATGAAGTGGCTCATATTGCTAATGGTTCACATCCAGGAAACTGCATTTCCCTTCTTCGTATAAATGTAGCAAGCAACTCATCCCAGAATGTGGAGCTTATGCTGCAAGAGAGTTGCACTGATCAATCTGGAAGCCTAGTAGTTTACACCACCATTGATGTTGATTCCATTCAGCTAGCAATGAGTGGTGAGGATCCTTCCTGCATTGCCCTTCTTCCACAAGGGTTCATGATAGTGCCAATGGACACACCAAACATTGGTACTTCATCTGAAGCTGTCACAGGACCTTTGCCAAATACTACTACAAGTTTCAATTCTGGGTGTCTTCTCACTGCTGGACTTCAAGTTCTTGCAAGCACAATCCCTTCTGCAAAACTCAACCTTTCGAGTGTGACCGCAATCAACAATCACCTGTGCAACACCATGCATCAGATTGAAGCTGCTCTTTGCAGCAGCACTAACAGCTCTCATCATCATGAGAATAATGGCAGTTTTGTTGGATCTTGCACTGAACCCACCACTAGTGGTGCACCCCCTAAGTAG 2406 0.4406 MYGDCQVMSNMGGNVVVNSDSLFSSSIQNSNFNFLPTMPFQPFPPLKEEDGILAGKEEMESGSGSEQVEDKSGNEQEGEQPPKKKRYHRHTALQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENESLKNDNYRLQAALRNIICPNCGGPGIMGPDMGLDEQQLRLENARLREELERVCCLTSRYTGRQIQTMAPPPSLMDPSLDLDMSIYSRHFTDPIPCTQMIPVPMMPPPEASSFPEGGLLMEEEKSLALDLAASSIDELLRMCHTHEPLWIRSSENVMEVLNFEEHARMFPWPLNLKHRSEVRREASRDSAVIIMNSVTLVDAFLDAQKWMELFPTIVSRAKTVQIISSGASGHACGSLQLMYAELQVLSPLVSTRETHFLRYCQQNAEQGTWAIVDFPIDTFHENFQPSYPRYCRRCSGCVIQDMPNGYSRVTWVEHGEVEEKPVHQIFGNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMSLAQRMIRTFSLNMSTSSGQSWTAISDSPEDTVRITTRKITEPGQPNGVILGAVSMIWLPYPHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFMIVPMDTPNIGTSSEAVTGPLPNTTTSFNSGCLLTAGLQVLASTIPSAKLNLSSVTAINNHLCNTMHQIEAALCSSTNSSHHHENNGSFVGSCTEPTTSGAPPK 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0389 801 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 74 777 IPR042160 -
Lal15g0389 801 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Lal15g0389 801 SUPERFAMILY Bet v1-like 544 767 - -
Lal15g0389 801 Gene3D - 69 152 - -
Lal15g0389 801 ProSiteProfiles START domain profile. 274 511 IPR002913 GO:0008289
Lal15g0389 801 SUPERFAMILY Homeodomain-like 75 142 IPR009057 -
Lal15g0389 801 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Lal15g0389 801 MobiDBLite consensus disorder prediction 57 89 - -
Lal15g0389 801 Pfam Homeodomain 84 139 IPR001356 GO:0003677
Lal15g0389 801 SMART HOX_1 82 145 IPR001356 GO:0003677
Lal15g0389 801 Pfam START domain 285 508 IPR002913 GO:0008289
Lal15g0389 801 Gene3D - 332 492 IPR023393 -
Lal15g0389 801 MobiDBLite consensus disorder prediction 57 84 - -
Lal15g0389 801 SUPERFAMILY Bet v1-like 275 510 - -
Lal15g0389 801 CDD homeodomain 84 142 IPR001356 GO:0003677
Lal15g0389 801 SMART START_1 283 508 IPR002913 GO:0008289
Lal15g0389 801 CDD START_ArGLABRA2_like 278 507 - -
Lal15g0389 801 MobiDBLite consensus disorder prediction 782 801 - -
Lal15g0389 801 PANTHER - 74 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0389 Lal-Chr15 2653362 2659618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0389 8 773 Homeobox Transcription Factor Family AT5G46880 57.057 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal15g0389 START 2.5e-38 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0389 - - gmx:100812829 1316.6