Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0388 ATGAAATGTGATGTTGAGAGGAGACAACTTTTTCAACTTTCTGCGTATGCATATGTTGAATGTTTCTATTCTCTAAGATTGTTTACTGTTGACCTTGGTCCTTTTTGGCCGTCTGTGCTAAATTCAGATATTTATTTTTTCCTCTTCTCAGTGACTTTTCCGAAGCAGGGTGAAGGAAGAGGTCGCCTATCTAGTGAAGTTAAAAATGGGTTAGAATATTTGAAGCGTAAAAGGCTTGAGCGAGCTAAATCTGTAACTGCCACTAAGACCAGTATTGCTAACATGATGAACAGAAGTGGTGGAGATGGTTTAAGAGCTTCGGAATCTTGCGGTATCGGATTGCATAGTAATGCAGATGTCTTTTCCAAGAGGAAGGTGGATAAGTTTGACACTAGTGACCTAGAATGGACTGAAAAAATCCCAGAGTGTCCTGTGTATTCCCCAACAAAGGAAGAATTTGAGGATCCTTTGGTTTATTTGCAGAAAATAGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTATTTCCCCTTTGAATGCATCTGTTCCTGCTGGGGTTGTTTTAATGAAGGAGAAAGTAGGATTCAAGTTTACAACAAGAGTGCAGCCCCTTCGCCTTGCTGAATGGGATGCTGAAGACAAAGTCACATTTTATATGAGTGGAAGAACTTACACATTCCGTGATTATGAGAAAATGGCGAACACAATTTTTGCGCGAAGATATTGCAGTGCTGGGTGTCTTCCAGCCACATACTTGGAAAAAGAGTTCTGGAATGAAATCAGTCGTGGGAAGATGGAATCTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCTTCTCCCACTGATCAGCTTGGGAACAGCAAATGGAATTTGAAGAATCTTTCGAGGTTGCCAAAATCAATTTTGCGGCTCTTGGAAATGTCAATTCCGGGAGTAACGGAGCCCATGCTATACATTGGAATGTTATTTAGTATGTTTGCATGGCACGTCGAAGATCATTACTTGTACAGCATTAATTATCAGCACTGTGGAGCATCCAAAACATGGTACGGTATTCCTGGTCATGAAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACATGTATATACTAATGATATTTTGTCGAGTAATGGGGAAGATGCAGCCTTTGATGTTCTTTTGGGGAAAACAACACTATTTCCTCCGAATATTTTGATGGAGCATGAAGTCCCTGTGTACAAGGCTGTTCAAAAACCGGGGGAGTTTATAATAACCTTCCCTAGGGCATATCATGCTGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCAATTGGTGACTGGTTTCATTTAGGGGCTATTGCTAGTCGGAGATATGCACTTCTTAACAGGATTCCCTTGTTGCCCCATGAAGAACTTCTATGCAAAGAAGCAATGATTCTCCATACAAGCTTGGAACTTGAAGATGCAGACTTTCCTTCTTCTGACTTATTGTCTCGTAATTGCATTAAGATTGCTTTTGTCAATTTAATGCGTTACCAGCATTGTGCACGATGGTTGCTAATGAAGTCAAGGGCATCTTTAAGTGTCTCTTCTCATTGTCATGGCACAATTCTCTGCACCCTCTGCAAACGTGATTGTTATATAGCTTATGTTGACTGTAACTGTCACATGCATCCTGTATGTCTACGCCATGATGTTGGATCTCTTGGCTTCACCTGTGGGAGTACGTACACTCTTTATTTGAGGGAGGATATTACGGATATGGAAGCTGCCGCCAAGATGTTTGAGCAGGAAGATGGGGCATTGAACGAGATACAACATGACCAAAATCTGTATTCATATCCATTGTCAAATATGTTTCAGAGAGCTGAGGCAAAGGGATACACACCTTATTCTGAGCTGAAACTTGATTCTGTTATTGAATTTTATTCAAGTCCAGAGCAGTCAGCAAATAATCTAGAGTGTGAAACACAAAGTCAAACTGTTTATGGACATTCCTCTGAAAATCTTAAGCCAGAAATGGAATCCCTTGCGAGTAACTCTACTCTCAAACATGCTGAAGGGCATGCAAATTCCATTTTCCGCACTGTTGACTTTGAAGAGTTTGGTGACAGAATAACTAACACTGCATGTAAATCTTCGCTACCCCCTGATCACTATCATGAAAGCTTGTGTAAACTGCCGGCTGATCTTCATAGAGTTGACACAAACCCCATTGTGTCTAATGAGAGTGATGATTCTGATTTAGAGATGTTTAGGGTAAAGCGCCCTTCTGCCCTGAAAGCGGAGAAGAGAAATGCGGCTGATGCTATGTCGTCAAAATGTACTGAGCAACAGGGACTTAAACGGTTGAAGAAAGTCCTTCCCGAACGAAGAAGTAGGCTACCAACAGATTTCAGCAGAACCAGTGAATCAATTAACAAATATAGTCACCCTGTCAATCATAAAGTTGGTGGTGAAATTTCCTCGGGGGATAAAGTTGCAAGGGGAAATGGCATTCCCATATCTATAAGGCATAAGAAGTTAGGGAATGAAGGGATAAATAGGCAACGAGATCGCCCCAGGAAAGAAAGGTTGCAGCAGACTTATAAAGAGCCACATTCCATTGAGATAGGGCCAAAGCGACTTAAAGTTAGAGGCCCTTAA 2649 0.4122 MKCDVERRQLFQLSAYAYVECFYSLRLFTVDLGPFWPSVLNSDIYFFLFSVTFPKQGEGRGRLSSEVKNGLEYLKRKRLERAKSVTATKTSIANMMNRSGGDGLRASESCGIGLHSNADVFSKRKVDKFDTSDLEWTEKIPECPVYSPTKEEFEDPLVYLQKIAPEASKYGICKIISPLNASVPAGVVLMKEKVGFKFTTRVQPLRLAEWDAEDKVTFYMSGRTYTFRDYEKMANTIFARRYCSAGCLPATYLEKEFWNEISRGKMESVEYACDVDGSAFSSSPTDQLGNSKWNLKNLSRLPKSILRLLEMSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHEALEFERVVREHVYTNDILSSNGEDAAFDVLLGKTTLFPPNILMEHEVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFAIGDWFHLGAIASRRYALLNRIPLLPHEELLCKEAMILHTSLELEDADFPSSDLLSRNCIKIAFVNLMRYQHCARWLLMKSRASLSVSSHCHGTILCTLCKRDCYIAYVDCNCHMHPVCLRHDVGSLGFTCGSTYTLYLREDITDMEAAAKMFEQEDGALNEIQHDQNLYSYPLSNMFQRAEAKGYTPYSELKLDSVIEFYSSPEQSANNLECETQSQTVYGHSSENLKPEMESLASNSTLKHAEGHANSIFRTVDFEEFGDRITNTACKSSLPPDHYHESLCKLPADLHRVDTNPIVSNESDDSDLEMFRVKRPSALKAEKRNAADAMSSKCTEQQGLKRLKKVLPERRSRLPTDFSRTSESINKYSHPVNHKVGGEISSGDKVARGNGIPISIRHKKLGNEGINRQRDRPRKERLQQTYKEPHSIEIGPKRLKVRGP 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0388 882 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 104 882 - -
Lal15g0388 882 SMART cupin_9 290 460 IPR003347 -
Lal15g0388 882 PANTHER LYSINE-SPECIFIC DEMETHYLASE 104 882 - -
Lal15g0388 882 Pfam jmjN domain 144 176 IPR003349 -
Lal15g0388 882 MobiDBLite consensus disorder prediction 810 882 - -
Lal15g0388 882 Pfam C5HC2 zinc finger 540 591 IPR004198 -
Lal15g0388 882 Pfam JmjC domain, hydroxylase 320 443 IPR003347 -
Lal15g0388 882 MobiDBLite consensus disorder prediction 843 882 - -
Lal15g0388 882 ProSiteProfiles JmjN domain profile. 143 184 IPR003349 -
Lal15g0388 882 SMART JmjN_1 142 183 IPR003349 -
Lal15g0388 882 SUPERFAMILY Clavaminate synthase-like 221 476 - -
Lal15g0388 882 Gene3D Cupin 136 465 - -
Lal15g0388 882 ProSiteProfiles JmjC domain profile. 290 460 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0388 Lal-Chr15 2622118 2630883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0388 140 603 JUMONJI Transcription Factor Family AT2G34880 32.222 3.74e-64 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lal15g0388 JmjC 2e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0388 - - gmx:100798611 1308.51