Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0387 ATGGAGCTATTCCCAGCACAACCAGACTTATCATTACAAATAAGCCCTCCAAACACAAAACCGACATCAAGTTGGAAGAGAAGTACAACAGATGAAGAAGTGGATTTGGGGTTTTGGAAGAGAGCTTTGGATTCTAGAAACTCATTATCATCTTCACTGCCCAAAACTGATTCCACTTGTTTTGACTTCTCCCTCTCTTATCCAACAAGGACTTCTTCTAACACCAACAACACTATGAACTCCTTTGAAAACAAAACCATTAATAATGCAAACACCACCACCATCAACAACAACAATAACAACAACCCTTTTCTATCATTTCATCAAAATCACTACTTTCACCAACAGAATCCACTGGTGTTCCAGCCACAACCGCAGCAGCAGCAGCAGCACCAAAGCTTAAGCCAAGAGCTTGGCTTTCTGAGACCTATAAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTACTATGACATTTCCACAATTTCAACATCATCGACAACTTCTAGATGTTTCTTCCACTGCTCCTTCATCTATTTCCAACACAACCACTACATCCCCTTTTCATCATTCTCAAGCTTTGATGCGGTCAAGGTTCTTGTCACGCTTCCCTGCCAAGCGAAGCATGAGGGCTCCTAGGATGCGTTGGACAACTACACTCCATGCTCGCTTTGTTCATGCCGTTGAGCTCTTAGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTGATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCTGCTTCTTCAGGGCAATCTGATGTATACGATAATGGATCATCTGGAGATAATTCTGATGATATAATGTTTGATATTAACTCTTCAAGAAGATCTGATCTTTCCATTAAGCAGGGAAGGCCAAGTGTTAATCAAGATAAACAATATCATGGCCTCTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGACTGATTCTGTTAGAAACGTGCCTTCTCTTGAGCAGGATACGGATCCAAAGTGCTTAAGCTATGAGAGAATATCAGATAGAAGCTCATCTTCAAACCATTCAGGATCAAGCCCGAAAAAGCCAAATTTGGATTTGGAATTCACCTTGGGTCAGCCACTTTAA 1179 0.4249 MELFPAQPDLSLQISPPNTKPTSSWKRSTTDEEVDLGFWKRALDSRNSLSSSLPKTDSTCFDFSLSYPTRTSSNTNNTMNSFENKTINNANTTTINNNNNNNPFLSFHQNHYFHQQNPLVFQPQPQQQQQHQSLSQELGFLRPIRGIPVYQNPPPTMTFPQFQHHRQLLDVSSTAPSSISNTTTTSPFHHSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDNSDDIMFDINSSRRSDLSIKQGRPSVNQDKQYHGLWSNSSREAWLHGKPKTDSVRNVPSLEQDTDPKCLSYERISDRSSSSNHSGSSPKKPNLDLEFTLGQPL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0387 392 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 391 - -
Lal15g0387 392 SUPERFAMILY Homeodomain-like 209 265 IPR009057 -
Lal15g0387 392 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 212 265 IPR006447 GO:0003677
Lal15g0387 392 MobiDBLite consensus disorder prediction 11 25 - -
Lal15g0387 392 MobiDBLite consensus disorder prediction 336 392 - -
Lal15g0387 392 MobiDBLite consensus disorder prediction 362 380 - -
Lal15g0387 392 MobiDBLite consensus disorder prediction 303 322 - -
Lal15g0387 392 MobiDBLite consensus disorder prediction 270 296 - -
Lal15g0387 392 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 391 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lal15g0387 392 MobiDBLite consensus disorder prediction 1 28 - -
Lal15g0387 392 Gene3D - 211 268 - -
Lal15g0387 392 Pfam Myb-like DNA-binding domain 213 264 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0387 Lal-Chr15 2610301 2615684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0387 1 391 G2-like Transcription Factor Family AT4G17695 36.867 2.08e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal15g0387 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0387 - - aprc:113868756 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0387 15 2610301 2615684 Lal15g0387 15 2610301 2615684 ECH