Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0377 ATGGTAAGAAAGGAAGATGAAGAAGAAGCTTTACGCTTAAAGGGTTTAGCAGAGTCCAAATTCAAAAGCAATCATCTCAACTCATCTCTTAAATATGCCAAACGAGCCCAACGCCTCGCCCCTAATCTCCATTCCATCTCCGAAATCGTCACCTCCCTCACCATCCTCCGCGCCGCCGCTAGGTCTTCCACCACCACCACCATACCCAATTGGTATAAAATCCTTGATTTAGAGCCCTTCTCCAACATCAACCTTATCCGAAAACAGTACAAGAAACTCGCTTTCATCCTCCACCCAGACAAGAACTCCTTCCTTGGATCCGATGAGGCCTTCAAGTTGGTCGGTGAGGCTTCAAAGTTCCTATCGGACAAGGTTCGGAAGCAGGATTATGATATGAAGCTGCGGATGTGGATTCAAGAGGAGAAAGAGAATGAGAATGTGAGTGAAGAGGAAAGTGGAAATACTTTCTGGACTGTGTGTTCCACTTGCAAGCTATTGCACAAGTTTGAGAGAAGGTATGTGGGTCATAATTTGATTTGTCCTAGCTGCAATAAGAGTTTTAAAGCTGTGGAAGAGGTTAATGATCACGGGTCCAAGCAAAATGAACAAGTGGGGTCCAAAGGTGGGAGCTTTAAGTTGAAAGAGAATGTGGAGGTGGATGGGGGTGAGACATTGGGGGAGTTTATGTTGAGGAGGAAATTGAAATCAAAGGGGGTCAAAGGGAAAATGGGTAGTGAAAAAGATGGATTTTTGAAGGGTAAAGTTGGAGTTGATGAAGTGGGTAATGGGGATATGGAGAAGGAAGGTTTTTCTGAATGGGGTGGTGGGAGGTTGAGAACTAGTGGTTTGAGGAAGAGCATGAGTATGGTTGGGGAAGTGTTGGAGAGGTCAGATCCAAAGAGGATTAAGACTGGTGAAGAAACCATGACATTGGCTGAATTTCAGTCTGAGGTGAAGAAAAGATTGCAGCAAAAGAAGGTAAAGGAAAAGGAGGAGGAGGGTAACGATAAGAGGAGCACGCAGGGGGAGAAACTCGAGGGTTCGAAAAATAATAGGGGTTCAGCAGCTGGGAAAGTAAGGAGTTTGAAGAAGAGTGTGAAGCTTGCAATCAAGGAGAAGCATCAGGTTTCTATGAAGAAAAAGGAGTTGAGACTTCACAAGCATAAGGATTCCAGTGGTGGCAATTTGGAAAATATGGCGGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAACGGAGAGAAGCTTTAAGAAAGGCCAAGTCTGGGCGATATATGACGATGACGATGGAATGCCAAGGAGTTGTGCCTTGATTGATGAATTCGTTTCTGAAAATCCTTTTGAAGTTAGAGTAAGTTGGTTAGATCTACAGAACAACAGGGACTGTGACCGAGCAGCACGTGAGCTTTACAACATTTATCCCAAGAAGGGCTCGGTATGGGCACTTTATGGCGAGGCATCTGTAGACGTGGATACAAGAAGTTTTAAAGTCGGGGGAAAGAGATGCTATGACATTGTTGTGTTTTTTACTAGTTACAGTGAGGTGAATGGTCTGAGCGTGGCATATCTTAAGAAGGTTGATGGTTACAAGACAGTCTTTAAGAGGCAAGAGATGGGGAGTCATGCAATTAGATTTCTCGGAAAGGATGATATGTGGTTAATTTCTCATCAGATCCCTGCACGGAAATTTCCGTGTAACGACGAGACTCCTGAACTATTGAAAGACTGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGAATTGCTTACTATTGGTGATATTGTTGTGAGTCTTTACCGTAAAATTATAAGACTTGCAATGTTGTATGAGACTGAATGTTGGGCGATAAAATGTCAACAAGAGAATAAACTTAATGTAACAAAGATAAGAATGTTGCGTTGGATGAATGGACACACTAGACAAGATAGAATTAGGAATGAACGTATTAGAGAAAAAGTTGGGGTAGCTCCTGTTGTAAAAAAGATGGTAGAATCTCACCTTTTAGGTGGTTCAGGCATGTATGAAGAAGACTGGTAG 2043 0.4288 MVRKEDEEEALRLKGLAESKFKSNHLNSSLKYAKRAQRLAPNLHSISEIVTSLTILRAAARSSTTTTIPNWYKILDLEPFSNINLIRKQYKKLAFILHPDKNSFLGSDEAFKLVGEASKFLSDKVRKQDYDMKLRMWIQEEKENENVSEEESGNTFWTVCSTCKLLHKFERRYVGHNLICPSCNKSFKAVEEVNDHGSKQNEQVGSKGGSFKLKENVEVDGGETLGEFMLRRKLKSKGVKGKMGSEKDGFLKGKVGVDEVGNGDMEKEGFSEWGGGRLRTSGLRKSMSMVGEVLERSDPKRIKTGEETMTLAEFQSEVKKRLQQKKVKEKEEEGNDKRSTQGEKLEGSKNNRGSAAGKVRSLKKSVKLAIKEKHQVSMKKKELRLHKHKDSSGGNLENMAVVDSDFYDFDKDRTERSFKKGQVWAIYDDDDGMPRSCALIDEFVSENPFEVRVSWLDLQNNRDCDRAARELYNIYPKKGSVWALYGEASVDVDTRSFKVGGKRCYDIVVFFTSYSEVNGLSVAYLKKVDGYKTVFKRQEMGSHAIRFLGKDDMWLISHQIPARKFPCNDETPELLKDCWELDPASLPSELLTIGDIVVSLYRKIIRLAMLYETECWAIKCQQENKLNVTKIRMLRWMNGHTRQDRIRNERIREKVGVAPVVKKMVESHLLGGSGMYEEDW 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0377 680 PRINTS DnaJ domain signature 72 90 IPR001623 -
Lal15g0377 680 PRINTS DnaJ domain signature 90 105 IPR001623 -
Lal15g0377 680 PRINTS DnaJ domain signature 106 126 IPR001623 -
Lal15g0377 680 MobiDBLite consensus disorder prediction 313 361 - -
Lal15g0377 680 Pfam Domain of unknown function (DUF3444) 398 461 IPR024593 -
Lal15g0377 680 Pfam Domain of unknown function (DUF3444) 464 565 IPR024593 -
Lal15g0377 680 SMART dnaj_3 69 126 IPR001623 -
Lal15g0377 680 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 462 - -
Lal15g0377 680 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 463 594 - -
Lal15g0377 680 PANTHER BNAC03G44070D PROTEIN 463 594 - -
Lal15g0377 680 PANTHER BNAC03G44070D PROTEIN 6 462 - -
Lal15g0377 680 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Lal15g0377 680 Gene3D DnaJ domain 57 156 IPR036869 -
Lal15g0377 680 CDD DnaJ 70 123 IPR001623 -
Lal15g0377 680 SUPERFAMILY Chaperone J-domain 67 139 IPR036869 -
Lal15g0377 680 Pfam DnaJ domain 70 131 IPR001623 -
Lal15g0377 680 MobiDBLite consensus disorder prediction 318 345 - -
Lal15g0377 680 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0377 Lal-Chr15 2540060 2542969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0377 5 190 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.359 4.64e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0377 - - lang:109332126 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0434 16 2635196 2636371 Lal15g0377 15 2540060 2542969 LSH