Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0376 ATGTGGGGAGAAGGAGTAAATGGGGATTTCAGATACTGTAATCAACGTATGGGCAGCAGTGAGATGGATAAAACCCCAAAAGAGAAGGAGTCTAAGATGCCTCCTCCTACGTCACAGGAGCAGTCTTCGGCAACTGGTGCTGGAACAATTAATCCTGACTGGTCCAACTTTCAGGCATATTCTCATATGCCTCCACATGGCTTCTTGGCACCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACTCCACCACATCCCTACGTTGCAATGTATCCCCAAGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTAATGGTATTGCTGAGGCTTCAGGAAATACCCCTGGAAGCATGGAAGCGGATGTTGTTAAGCCTCCTGATGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATAACGGGGAAAAATAATGAACATAGTAAAACACGTGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCTGATTCTCAGAATGACTCTCAATTGAAATCAGGGGGCAGGCAAGATTCATATGAAGAAGAACCATCTCAAAATGGCAGTTCGGCACATGCTTCTCATAATGAGGGGCTTAATGCACCTCATACAGTGGTTAACCAAACTATGTCCGTTGTACCTATTTCTGCTGGTGGTGCTCCTGGAGCAGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTGCACCAACTTCAGCCAACATTCCTGCAATGCGTGGAATGGCTTCGTCTCCTGCAGTTGCTGGAGGGGTGGTTACTGCTGGATCACGGGACAGTGTTCAGTCTCAACTTTGGCTGCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAACAGGCCGAGTGTGATGAACTAGCTCAGCGAGCTGAGGCTTTGAAAGAAGAAAATGCTTCTCTCCGATCAGAAGTAAGTCGAATCAGGAGCGGGTATGAGCAGCTACTCTCCGAAAATGCAGCACTGAAGGAGAGACTCGGGGAACCCTGTAACGATGATCCTGGGCATGGAAGGAGTGATCAGCATGTGGATAATGACACTCAACAGAGTGGGCAGACAGAGGCTGTGCAGGATGGTCATTAG 1275 0.4722 MWGEGVNGDFRYCNQRMGSSEMDKTPKEKESKMPPPTSQEQSSATGAGTINPDWSNFQAYSHMPPHGFLAPSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPQGGIYAHPSMPPGSYPFSPFAMPSNGIAEASGNTPGSMEADVVKPPDVKEKLPIKRSKGSLGSLNMITGKNNEHSKTRGTSANGIHSKSGESASEGTSEGSDADSQNDSQLKSGGRQDSYEEEPSQNGSSAHASHNEGLNAPHTVVNQTMSVVPISAGGAPGAVPGPTTNLNIGMDYWGAPTSANIPAMRGMASSPAVAGGVVTAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSGYEQLLSENAALKERLGEPCNDDPGHGRSDQHVDNDTQQSGQTEAVQDGH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0376 424 MobiDBLite consensus disorder prediction 389 407 - -
Lal15g0376 424 Coils Coil 341 375 - -
Lal15g0376 424 SMART brlzneu 321 385 IPR004827 GO:0003700|GO:0006355
Lal15g0376 424 Pfam G-box binding protein MFMR 17 112 IPR012900 -
Lal15g0376 424 MobiDBLite consensus disorder prediction 322 346 - -
Lal15g0376 424 MobiDBLite consensus disorder prediction 383 424 - -
Lal15g0376 424 Pfam Disordered region downstream of MFMR 151 288 - -
Lal15g0376 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 17 422 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lal15g0376 424 MobiDBLite consensus disorder prediction 35 51 - -
Lal15g0376 424 MobiDBLite consensus disorder prediction 129 240 - -
Lal15g0376 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 323 386 IPR004827 GO:0003700|GO:0006355
Lal15g0376 424 SUPERFAMILY Leucine zipper domain 324 380 IPR046347 GO:0003700|GO:0006355
Lal15g0376 424 MobiDBLite consensus disorder prediction 1 51 - -
Lal15g0376 424 MobiDBLite consensus disorder prediction 408 424 - -
Lal15g0376 424 CDD bZIP_plant_GBF1 326 373 IPR045314 GO:0003700|GO:0006355
Lal15g0376 424 Pfam bZIP transcription factor 321 383 IPR004827 GO:0003700|GO:0006355
Lal15g0376 424 MobiDBLite consensus disorder prediction 162 240 - -
Lal15g0376 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 328 343 IPR004827 GO:0003700|GO:0006355
Lal15g0376 424 Gene3D - 324 378 - -
Lal15g0376 424 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 17 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0376 Lal-Chr15 2530936 2538597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0376 17 424 bZIP Transcription Factor Family AT2G35530 61.483 2.14e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal15g0376 MFMR_assoc 5.5e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0376 K09060 - gmx:778122 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0376 15 2530936 2538597 Lal15g0376 15 2530936 2538597 ECH
Lal16g0433 16 2626263 2634597 Lal15g0376 15 2530936 2538597 LSH
Lal15g0376 15 2530936 2538597 Lal23g1134 23 12854400 12863399 LSH