Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0360 ATGTTCAATAAATGGGAAGCTCAGAAATGGTGGGGTGAAAATTACGATCGCATCATGGAACTTTACAATGTGCAGAGATTCAATCAACAAGCTCTCAACACTCCTTCAAGATCAGTGGATGAGCCAAGAGATTCTTCTTACTCAAGATTGAGAGAGAGCCCAATGACCTCATCGTTGAACAAGGATTGGACAACGACGAGTCACTATAAACCTTCTGCAAACAGAGGGTATAACCCTGCTGAACCTTGTAAACGAAGTGCCAGGGTAGAATTTCATGCAGGGTCTTCAATGGAACCATCAAGGACAACGACATCTTCTATAGACGACCCTTCTATCAGCAATGCCAATGAGGTAGAGGCTGAATGGATCGAAGAATATGAACCTGGAGTCTACATTACAATCAGACAATTAGCTGATAGCACAAGAGAACTTAGGCGTGTGAGGTTTAGTCGAGAAAAATTTGGAGAGGTAAATGCAAAGAATTGGTGGGAAGAAAATAGAGACAGAATACAAGCTCAATACCTTTGA 528 0.4186 MFNKWEAQKWWGENYDRIMELYNVQRFNQQALNTPSRSVDEPRDSSYSRLRESPMTSSLNKDWTTTSHYKPSANRGYNPAEPCKRSARVEFHAGSSMEPSRTTTSSIDDPSISNANEVEAEWIEEYEPGVYITIRQLADSTRELRRVRFSREKFGEVNAKNWWEENRDRIQAQYL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0360 175 ProSiteProfiles BRX domain profile. 120 175 IPR013591 -
Lal15g0360 175 MobiDBLite consensus disorder prediction 49 73 - -
Lal15g0360 175 ProSiteProfiles BRX domain profile. 1 23 IPR013591 -
Lal15g0360 175 MobiDBLite consensus disorder prediction 96 111 - -
Lal15g0360 175 MobiDBLite consensus disorder prediction 32 81 - -
Lal15g0360 175 MobiDBLite consensus disorder prediction 92 111 - -
Lal15g0360 175 Pfam Transcription factor regulating root and shoot growth via Pin3 119 174 IPR013591 -
Lal15g0360 175 Pfam Transcription factor regulating root and shoot growth via Pin3 1 22 IPR013591 -
Lal15g0360 175 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 175 - -
Lal15g0360 175 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 175 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0360 Lal-Chr15 2421792 2426973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0360 1 175 Major Intrinsic Protein MIP AT1G31880 60.000 7.12e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0360 - - gmx:100819016 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0360 15 2421792 2426973 Lal15g0360 15 2421792 2426973 ECH
Lal15g0360 15 2421792 2426973 Lal23g1147 23 12939424 12948765 LSH