Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0359 ATGGAGAGGTACAACTTAATTAAGGAAGTTGGTGATGGGTCATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCATGGGAGGAGTGTGTAAATCTGAGAGAAGTCAAGTCATTACGAAAGATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGCGAAAGTGACATTCTATACTTTGTTTTTGAGTATTTGGAATGCAACTTATATCAACTTATGAAAGACAAGCAAAAACTGTTTTCTGAAGGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATCCACCGGAATGGATACTTCCATCGTGACATGAAGCCTGAAAACTTGCTGGTTACTAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCCCGTGAGATAAGTTCACAGCCGCCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTATCTATATGGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTTTCTCTCCGTCCTCTTTTTCCGGGTGTCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTTCTAGGCAGTCCAACAACTGAATCATGGGCTGATGGACTCAAACTTGCAAGAGATATTAACTATCAATTTCCACAGCTTGCTGGTGTACAACTTTCTTCATTGATCACATCCGCAGGTGTTGATGCAATCAGCCTTATCACATCACTTTGCTCATGGGATCCTTGCAAGAGGCCAACAGCTTCCGAGGCCCTACAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTCCGCACCAGAGCGGTAGCTAGAACTCCTCCATCAGTTGCAACAAGGGGTGCCTTGGATCAGCAAGGGGTCAAGAGATATTCGAGTGCTTTCACTAATTCAATGCTCACCAACAATTTTACTTCCCCGAAATTACATCCTTCTTTAGCTTCAGGTGTCCAAAGGAAGCTGAATATGGTGAATCAGGATGGAATAAAGAATGATAATTCAATGAAAACTACAAAGGAACCAAAATATCGACCACCAGGAAAGGACAGCCCAACTTCAATAAACAAAGGGAGGAGTAGACATGGTGTTTCGGAAACTGCTGAGAAGTTAGCCAATATGTCTGTTGGTAATCGAAGACAATCCATTGGGCAACCTCGTCCTCCTCCTCCAATGAAGACTGGTGTCAATTGGATTCCTGAATCTGGAAATTACATGCTCAGGCCCACTCAACAGATTCCTACTGGAAGGACTTTCATAAGAAAAGTTGTCGGATGA 1359 0.4216 MERYNLIKEVGDGSFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYLECNLYQLMKDKQKLFSEGEVRNWCFQVFQGLAYIHRNGYFHRDMKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYGSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICSVLGSPTTESWADGLKLARDINYQFPQLAGVQLSSLITSAGVDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARTPPSVATRGALDQQGVKRYSSAFTNSMLTNNFTSPKLHPSLASGVQRKLNMVNQDGIKNDNSMKTTKEPKYRPPGKDSPTSINKGRSRHGVSETAEKLANMSVGNRRQSIGQPRPPPPMKTGVNWIPESGNYMLRPTQQIPTGRTFIRKVVG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0359 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 424 - -
Lal15g0359 452 CDD STKc_MAK_like 4 283 - -
Lal15g0359 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lal15g0359 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0359 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0359 452 PANTHER - 1 424 - -
Lal15g0359 452 Gene3D Transferase(Phosphotransferase) domain 1 84 287 - -
Lal15g0359 452 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lal15g0359 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0359 452 MobiDBLite consensus disorder prediction 354 418 - -
Lal15g0359 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lal15g0359 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0359 Lal-Chr15 2413612 2419894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0359 1 290 Core Cell Cycle Gene Families AT3G48750 36.913 5.45e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lal15g0359 Pkinase 2.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0359 K08829 - gmx:100810150 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0359 15 2413612 2419894 Lal15g0359 15 2413612 2419894 ECH
Lal15g0359 15 2413612 2419894 Lal23g1149 23 12949145 12955349 LSH