Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0351 ATGGATAATGGCTATAGTACTGAAAACCTTATTGTCCCACTCATTGCAATGATCACAGCAGCACTTGTTTTCTTCATATACCATCTCATAGCTATTTGTTTATGGGGCAACCACATCAGAATGGACCAAAACCACCAACAGCAGTCACTGCAAGCAGCGGCAGCAACACTGAGCCACAACCATGGCATTTCTTACCCATTGGCACACTTGATTCCAATACACAAATATCACAAGAAGGGAAAAGTTGATGGTGATGAAGAAGGTGATGACAATAGTACTTGTGCTGTGTGTTTAGGAGATTTTGAGGAAGGTGAAGAATTGAGAACTTTACCTGAATGCATGCACTGTTTTCACGTACCATGCATTGATATGTGGCTCTATTCTCATACTACTTGCCCCATTTGTCGTGCCAATGCAATCATGCTCCAACATGATGCAAATTACTATGCTCATAATCATTTGAATCCACATCACAGCATAAATATTATGCAAAATACTACTCTTAGACCAAGTTGA 516 0.4012 MDNGYSTENLIVPLIAMITAALVFFIYHLIAICLWGNHIRMDQNHQQQSLQAAAATLSHNHGISYPLAHLIPIHKYHKKGKVDGDEEGDDNSTCAVCLGDFEEGEELRTLPECMHCFHVPCIDMWLYSHTTCPICRANAIMLQHDANYYAHNHLNPHHSINIMQNTTLRPS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0351 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 140 IPR013083 -
Lal15g0351 171 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Lal15g0351 171 Pfam Ring finger domain 93 136 IPR001841 -
Lal15g0351 171 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 7 164 - -
Lal15g0351 171 SUPERFAMILY RING/U-box 85 143 - -
Lal15g0351 171 SMART ring_2 94 135 IPR001841 -
Lal15g0351 171 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 164 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0351 Lal-Chr15 2380570 2381085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0351 12 137 C3H Transcription Factor Family AT5G17600 36.567 1.63e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0351 - - lang:109332570 230.335