Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0339 ATGGCAGGACAATCAAGGAAGTGGATGATATTGGTAGCAGTAATATGGATTCAAGCATTCACTGGAACCAATTTTGATTTCTCAGCTTATTCATCTACTTTCAAATCTGTACTCAAAATTTCTCAAGTTCAACTCAACTACCTTGCTACTGCAAATGACTTAGGCAAAGTTTTTGGTTGGTCTTCAGGTCTTGCACTCATGTACCTTCCTCTTTCACTTGTTATGTTCATTTCTGCTTTCATGGGTTTCATTGGTTATGGACTACAATGGCTTCTCATCAACAATCTCATCACTTTGCCTTATTTTCTGGTTTTTCTTCTGTGTCTGTTAGGAGGCTGCAGCATTTGTTGGTTCAACACAGTATGTTTTGTTGTCTGCATTAGGAATTTCCCAGTTAACAGGCCCCTTGCATTATCACTCACTGTGAGTTACAATGGTGTAAGTGCAGCGCTCTATACCCTTGCTGCCAATTCAATAGACCCCTCATCCGATGCATTGTATCTGCTTTTGAATGCCCTTGTTCCCCTACTCATTTCCTTTGTAGCATTAGTCCCTATTCTTCGCCAACCACCTTTAGAACCTCTTCGTCCCGATACAGCTCGCAAGAACTCACTAATATTCCTGATACTCAACTTCCTAGCCATTTTCACTGGCCTTTATCTCCTTGTCTTTGGCTCATCAGCTTCTAATGAAAACACTGCAAGGCTTTACTTTGGAGGAGCTACTTTGCTCCTCATTTCTCCACTATGCATTCCTGGCATTATATATGCTAGAAATTGGTTTCATCGAGCCGTCCATTCTAATATTAGGGTGGAAAGTTCTGGCTTTATTCTTGTGCATGTTGATGATCTTGAGCTCCATAAAGAACTCCTTACTCGTCAAAACAGTACTGTAAGCAATGGAGAGGGTCACAACCTGCTGAGTGACAATGGATCCATGTTGAGGGCAAAAAGTAGTGGTGTGTGTTGTGACGGGTTGCTTGATCGGGATCAGTTGTCAATGCTAGGAGAAGATCACACAGCTGGAGTGCTTGTCACAAGGTTGGATTTTTGGTTTTATTATGTTGCATACTTCTGTGGAGGTACAATTGGTCTTGTCTACAGCAATAATCTAGGACAGATAGCCCAATCTCTGGGGTTCCATTCAAATGTTTCTACTCTAGTCACGCTATACTCATCCTTCTCCTTTTTCGGTCGCTTGCTTTCAGCTGGACCAGACTATATTCGAAATAAGTTCTACTTTGCAAGAACTGGATGGCTAACCATTGCACTGTTACCAACCCCAATCGCATTCATCGTGCTTGCTGCATCAGACAGTGCTGTGGCACTTTATACAGGAACTGCACTAATTGGTTTGAGCTCAGGTTTCATATTTGCTGCTTCTGTGTCAGTTACATCTGAACTGTTTGGACCTAACAGTTTTAGTGTCAATCACAACATTCTCATAACAAATATCCCGATCGGGTCGCTTCTCTATGGTTTTTTAGCTGCAGTAGTTTATGATGCCAATGCTCACTCAGTACCAGGAAGCATGATGCCTAATACACCAGTGTGCATGGGAAGGCAGTGCTACTTGTGGACATTTGTGGTGTGGGCATGCATATCTATCTTGGGACTAGCTTCTAGTGTGTTGTTATTCTTAAGAACCAAACATGCCTATGATCGTTTTGAGAGACACCGTATTTCAACACAACCAACCCTGTCTTAA 1707 0.4212 MAGQSRKWMILVAVIWIQAFTGTNFDFSAYSSTFKSVLKISQVQLNYLATANDLGKVFGWSSGLALMYLPLSLVMFISAFMGFIGYGLQWLLINNLITLPYFLVFLLCLLGGCSICWFNTVCFVVCIRNFPVNRPLALSLTVSYNGVSAALYTLAANSIDPSSDALYLLLNALVPLLISFVALVPILRQPPLEPLRPDTARKNSLIFLILNFLAIFTGLYLLVFGSSASNENTARLYFGGATLLLISPLCIPGIIYARNWFHRAVHSNIRVESSGFILVHVDDLELHKELLTRQNSTVSNGEGHNLLSDNGSMLRAKSSGVCCDGLLDRDQLSMLGEDHTAGVLVTRLDFWFYYVAYFCGGTIGLVYSNNLGQIAQSLGFHSNVSTLVTLYSSFSFFGRLLSAGPDYIRNKFYFARTGWLTIALLPTPIAFIVLAASDSAVALYTGTALIGLSSGFIFAASVSVTSELFGPNSFSVNHNILITNIPIGSLLYGFLAAVVYDANAHSVPGSMMPNTPVCMGRQCYLWTFVVWACISILGLASSVLLFLRTKHAYDRFERHRISTQPTLS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0339 568 Gene3D MFS general substrate transporter like domains 349 560 IPR036259 -
Lal15g0339 568 Pfam Nodulin-like 7 252 IPR010658 -
Lal15g0339 568 SUPERFAMILY MFS general substrate transporter 5 551 IPR036259 -
Lal15g0339 568 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 565 - -
Lal15g0339 568 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0339 Lal-Chr15 2290507 2300103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0339 1 562 Nodulin-like Gene Family AT1G31470 58.511 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0339 - - gmx:100814771 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0339 15 2290507 2300103 Lal15g0339 15 2290507 2300103 ECH
Lal15g0339 15 2290507 2300103 Lal23g1163 23 13040714 13047680 LSH