Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0338 ATGATGGACACTAACAAGGAGTTTGAGGCCTCAAACTATGGGAAATTTGAAATCAAACTCGTGAGGAAAAGTGTTGTAAAAGCTGTCAATCATTCACCAAACCCATTTTCAGTCCCTCTCTCAAATCTTGACCTACTTTCAGGTCGTTTTCCTGTTACATACTTATATTTCTACCTCAGACCAAAAGTAGAAAATTTTAGAACTTTTGTTGAGGTTCTTAAGAGCTCTCTAGCACAAGTACTTAGTTATTATTATCCCTTTGCTGGCCAAATTGTTCAAAATCTTAAAACTTGTGAGCTTGAAATCATTTGTGACAACAAGGGTGCTCTACTCATTGAAGCTCATGTGGATATCCCACTAATGAAGTTAGATTTTTATAATCTAAATGAAACCTTTCAAGGAAAGATAGTCTCTATTCATCAACCATATTTCCCCTTACAAATTCAGGTAACAAACTACACTTGTGGAGGCATTTCCATTGCATTTAGTTTTGACCATGCATTAGGTGATGCAAGTTCCTTTGGTAAATTTATTACCTCATGGTGTGAGATAGCTCAAAATAAACCAATGTCATGCATACCAAACCATACTAGACACCTATCTCCACGTTCTCCTCTCAAATATGAACCATCCTTAGACCAAGCTTTTATCAAATGCACCAAGGAAGAGATAAAGAACATTCCAATGAGCCACATCTCACTTAAGAGACTTTATCATATCAATGCATCAAGTATTAATATGCTGCAAAGACTTGCATCTGTTGGTAGCATCAAGAGAACAAAGATTGAAGCTTTCTCTGCCTATGTATGGAAGATAATGGCTAGTACCATTGATCAAAATCATGAAAAGTGCAAGATGGGTTGGTTGGTGGATGGAAGGGAAAGGATAAGTGAAGGTAAGAGTTCAATGTCAAATTACATTGGTAATGTTTTGTCTTTGGCTTTTGGAGAGGCAAGGATTCAAGAATTGAAGGAAGCCTCTATATCAGATATTGGTAGCATAGTGAATGAGTCAATTTCAAAGGTGAGCAATGAGGCTCATTTTTTGGATTTGATAGATTGGGTTGAGTGCAATAGGCCTGGTTTGATGATAGCAAAGACAGTGTTGGGTCAGGAGGGACCAGCCCTTGTTGTGTCCTCAGGAAGAAGGTTTCCTGTGACTGAAGTTGACTTTGGATTTGGGAGTCCTTTGTTAGGGACAGTTTACACTTCCATTGAAAGGCCAAGTGCTATGGGAGATGGATCCTGGACTGTATCTGCTATATTGTGGCCTAAACTAGCAGCTGCACTTGAAGATGACTCCATTTTCCATCAAATGTCAGCTTCTCATCTTAATATTTAG 1341 0.3833 MMDTNKEFEASNYGKFEIKLVRKSVVKAVNHSPNPFSVPLSNLDLLSGRFPVTYLYFYLRPKVENFRTFVEVLKSSLAQVLSYYYPFAGQIVQNLKTCELEIICDNKGALLIEAHVDIPLMKLDFYNLNETFQGKIVSIHQPYFPLQIQVTNYTCGGISIAFSFDHALGDASSFGKFITSWCEIAQNKPMSCIPNHTRHLSPRSPLKYEPSLDQAFIKCTKEEIKNIPMSHISLKRLYHINASSINMLQRLASVGSIKRTKIEAFSAYVWKIMASTIDQNHEKCKMGWLVDGRERISEGKSSMSNYIGNVLSLAFGEARIQELKEASISDIGSIVNESISKVSNEAHFLDLIDWVECNRPGLMIAKTVLGQEGPALVVSSGRRFPVTEVDFGFGSPLLGTVYTSIERPSAMGDGSWTVSAILWPKLAAALEDDSIFHQMSASHLNI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0338 446 Gene3D - 15 210 IPR023213 -
Lal15g0338 446 Gene3D - 220 432 IPR023213 -
Lal15g0338 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 39 443 - -
Lal15g0338 446 Pfam Transferase family 17 401 - -
Lal15g0338 446 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 39 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0338 Lal-Chr15 2287241 2288581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0338 41 422 Monolignol Biosynthesis Gene Families AT5G48930 24.694 1.14e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0338 - - gmx:100795616 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0338 15 2287241 2288581 Lal15g0338 15 2287241 2288581 ECH