Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0322 ATGCCACAAAAATGCATAGCACCAAAACCACAATGTTCCAATAGTAGTCACTCTATGGAAGAACCACCAGAGCTCACTGAGCCCAATGAACAATCTTTACCAAAACTCACTATGTTCCCCATAACTTTGAAGTTTGAGGGACTGGTGTACAAAGTAAAACTAGAGCAGAAAGGAGCATGTTGGGGTAGAACATGGACTTGCAAAGAGAAGACCATATTGAATGGGATGTCAGGTGTGGTATGTCCAGGAGAATTACTTGCTATGCTGGGGCCATCAGGGAGTGGCAAGACCACACTTCTCACGGCTCTCGGAGGCCGCCTCGGGGGTAAAATATCAGGAAAGATCACATACAACAATCATCCTTTCTCAGGTTCCATAAAAAGAAGAACAGGTTTTGTGACTCAGGATGATGTGCTATACCCTCATCTCACTGTCACTGAAACTCTAGTGTTCACTGCACTTCTAAGGCTTCCTAACAGCATAACAAGAGATGAAAAAGTTCAGCATGTAGAGAGAGTTATTGCTGAACTAGGACTCACTAAGTGCAGGAGCAGCATGATTGGTGGACCACTGTTTAGAGGAATATCAGGTGGTGAGAAAAAGAGAGTGAGCATTGGCCAAGAAATGCTCATCAATCCAAGTCTATTGTTGCTGGATGAGCCTACTTCAGGTTTGGATTCCACCACAGCTCTAAGGATCCTCAGAACAATCAAACGGCTCGCTAGTGGTGGTAGAACTGTTATCACCACCATTCATCAACCCTCTAGCCGCCTCTACTATATGTTTGATAAGGTGGTCTTGATCTCTGAAGGGTGTCCTATCTATTATGGTCCTGCTTCAACTGCCTTGGACTACTTTTCATCACTTGGTTTTACTACTAGTGTTACTGTCAATCCTGCTGATCTCTTACTTGATCTTGCCAATGGGATTGCCCCGGACTCAAAGCATGCAACTGAACAAAGCGAGAGCCTGGAACAAGAAAGGAAGGCGATAAGAGAAGCTCTCATATCTGCTTATGAGAAGAACATAGCTACAGGGATGAAAGTTGAGCTTTCCAGCCTGGAGGGGAACGATTACAATATCTCAAAGGATGCTTGCACAACAAGGTATCACAAAAAACATCAGCAGTGGTGCACAAGCTGGTGGCATCAGTTCAAGGTACTATTACAAAGGGGAGTGAGGGAGCGAAGGCATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCATAAGCGTCGCTTTTCTTGGCGGACTTTTGTGGTGGCATACACCAGAATCACACATTCAAGACCGGGTAGGCTTGATCTTTTTCTTCTCAGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCTCAAGAGAGGAGAATGCTGATCAAGGAACGGTCGTCGGGAATGTACCGCCTTTCATCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCACTTGAGCTTGCACTTCCAACAGCATTTGTCTGCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTATGACTTTTATCCTTTCTCTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATCTTGATGGATATTAAACAGGCGACTACTCTAGCTTCTGTGACATCCTTTGTATTTCTCATTGCTGGAGGATACTATATACAACACATTCCTCCCTTCATAGTATGGCTTAAGTACTTGAGCTACAGCTACTACTGTTACAAGCTACTTCTTGGTGTCCAGTACAATGAAAATGATTATTATGAGTGCTCAGAAGGGGTCTTGTGCAAGGTTGTAGATTTTCCTCCTATAAAATCAACCGGTTTGAGTCATGTGTGGGTTGATTTGTCCATTATGGCACTAATGTTGGTTGGTTATCGATTAGTTGCTTATTTAGCACTGCGAAAAATTAGGTAG 1938 0.4355 MPQKCIAPKPQCSNSSHSMEEPPELTEPNEQSLPKLTMFPITLKFEGLVYKVKLEQKGACWGRTWTCKEKTILNGMSGVVCPGELLAMLGPSGSGKTTLLTALGGRLGGKISGKITYNNHPFSGSIKRRTGFVTQDDVLYPHLTVTETLVFTALLRLPNSITRDEKVQHVERVIAELGLTKCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILRTIKRLASGGRTVITTIHQPSSRLYYMFDKVVLISEGCPIYYGPASTALDYFSSLGFTTSVTVNPADLLLDLANGIAPDSKHATEQSESLEQERKAIREALISAYEKNIATGMKVELSSLEGNDYNISKDACTTRYHKKHQQWCTSWWHQFKVLLQRGVRERRHEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVGLIFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVCIIYWMGGLKPDPMTFILSLLVVLYSVVVSQSLGLAFGAILMDIKQATTLASVTSFVFLIAGGYYIQHIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSEGVLCKVVDFPPIKSTGLSHVWVDLSIMALMLVGYRLVAYLALRKIR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0322 645 Gene3D - 62 289 IPR027417 -
Lal15g0322 645 CDD ABCG_EPDR 40 277 - -
Lal15g0322 645 MobiDBLite consensus disorder prediction 8 22 - -
Lal15g0322 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 290 IPR027417 -
Lal15g0322 645 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 26 643 - -
Lal15g0322 645 Coils Coil 314 334 - -
Lal15g0322 645 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 295 IPR003439 GO:0005524
Lal15g0322 645 SMART AAA_5 82 272 IPR003593 -
Lal15g0322 645 MobiDBLite consensus disorder prediction 1 32 - -
Lal15g0322 645 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Lal15g0322 645 Pfam ABC-2 type transporter 384 589 IPR013525 GO:0016020|GO:0140359
Lal15g0322 645 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 643 - -
Lal15g0322 645 Pfam ABC transporter 73 223 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0322 Lal-Chr15 2165013 2168050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0322 72 256 Calmodulin-binding Proteins AT2G36910 29.744 1.59e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0322 K05681 - gmx:100794774 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0322 15 2165013 2168050 Lal15g0322 15 2165013 2168050 ECH
Lal16g0380 16 2299106 2302225 Lal15g0322 15 2165013 2168050 LSH
Lal15g0322 15 2165013 2168050 Lal23g1174 23 13125679 13128510 LSH