Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0313 ATGAACTTGAATCATGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAGGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGACAATCTGAGACAAAGAATAATAGGAAATGGTGACGCAGAATTAGCATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTACGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACAGTATTTGCTGCTGGTATTGTGTCCAATGAGACAGAGGAAACATATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGACATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTATGCTGGTTTGCATACGACATCACGTTGCGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATTTCGAGTGCATGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAACAATCATTTTTAGCATATCTGAATGA 1302 0.3702 MNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEMYGMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTDNLRQRIIGNGDAELALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDEFNMMWEELIAKHALHNNAWTSQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYVESGYNFECMLKGEYRGLPQGPSEVTIIFSISE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0313 433 Pfam MULE transposase domain 221 315 IPR018289 -
Lal15g0313 433 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 162 403 IPR031052 GO:0006355
Lal15g0313 433 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 28 156 IPR031052 GO:0006355
Lal15g0313 433 Pfam FAR1 DNA-binding domain 43 127 IPR004330 -
Lal15g0313 433 PANTHER OS02G0262500 PROTEIN 28 156 - -
Lal15g0313 433 PANTHER OS02G0262500 PROTEIN 162 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0313 Lal-Chr15 2086798 2088512 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal15g0313 MULE 6e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0313 - - lang:109327968 498.434