Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0306 ATGGAGGGAAAAACATACGAGGAATTCACAGCCAGGTATTACGGCCTTTGCGCCATTGGAGGAATACTCAGTGCTGGTACTACCCATGTTGCTATGACCCCTCTTGATGTCTTGAAAGTCAACATGCAGGTGCACCCAATTAAGTATTATAGCATTTCCTCTTGCTTTACTACCTTAATGAAGGAGCAAGGGCCTTCTGCTCTCTGGAGAGGTTGGACTGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGCTGTAGATTTGGTCTCTATGAATATTTCAAGCAGGTTTATTCCAACATGTTGGTAGACCAGAACAGAAATCTTGTTTACTTTCTTAGTAGTGCATCTGCTGAAGTATTTGCTAATGTCGCTCTGTGCCCATTTGAAGCTATCAAAGTGAGGGTTCAAGCTCAACCCTGTTTTGCTAAGGGCCTGCTTGATGGCTTTCCCAAGTTATATGCATCAGAAGGCATACAAGGATTCTACCGTGGACTTGTACCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAGCATTCGAGCATTCAGTTGATTTTTTGTATCGCAACGTTGTCAAAAGAAAAAAAGAGGAATGTTCTAAAGCTCAACAACTTGGTGTAACATGTTTAGCTGGATATGCAGCTGGATCTGTTGGAAGCTTTATTTCTAATCCTGCTGACAATGTTGTTGCTTCTCTTTATAACAGAAAGGCTGATAGTCTCGTGCTGACTGTCAGAAAAATTGGGCTAGCTAATCTATTTACTAGGAGCCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCTATTACTTTGCAATGGTTTTTCTATGACACCATCAAAATTTTAGTTGGACTGCCAACTAGTGGTGAAGTTGTTACTGACTTGACTGGAGACGAGGCGGGCTAG 915 0.4219 MEGKTYEEFTARYYGLCAIGGILSAGTTHVAMTPLDVLKVNMQVHPIKYYSISSCFTTLMKEQGPSALWRGWTGKFFGYGAQGGCRFGLYEYFKQVYSNMLVDQNRNLVYFLSSASAEVFANVALCPFEAIKVRVQAQPCFAKGLLDGFPKLYASEGIQGFYRGLVPLLGRNIPFSMVMFSAFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYAAGSVGSFISNPADNVVASLYNRKADSLVLTVRKIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKILVGLPTSGEVVTDLTGDEAG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0306 304 SUPERFAMILY Mitochondrial carrier 16 281 IPR023395 -
Lal15g0306 304 Pfam Mitochondrial carrier protein 18 99 IPR018108 -
Lal15g0306 304 Pfam Mitochondrial carrier protein 107 193 IPR018108 -
Lal15g0306 304 Gene3D Mitochondrial carrier domain 17 285 IPR023395 -
Lal15g0306 304 PANTHER PHOSPHATE CARRIER PROTEIN 3 300 - -
Lal15g0306 304 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 3 300 IPR044677 GO:0005315|GO:1990547
Lal15g0306 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 189 IPR018108 -
Lal15g0306 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 96 IPR018108 -
Lal15g0306 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 285 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0306 Lal-Chr15 2045028 2049677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0306 1 294 Chloroplast and Mitochondria Gene Families AT2G17270 66.102 2.21e-151 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0306 K15102 - gmx:100788561 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0369 16 2221506 2225090 Lal15g0306 15 2045028 2049677 LSH