Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0297 ATGCAAGTTACTTGTGGTATTAAGCTGAGATTGAGGACACAAGAGTCTCTTGGTAGACCCTTTGTCTGTATGGAAGGCTTATTACACTTTTTTGAGTTCAATCAGGGGAGGATGACCAAGAAAGTCCATTCTCACAAGAAACAACATGGTGGCATGGATGCTCCTCGAAATAGCCTGGATTTGCAAGTAGAAACATCTCAGAATCACTGTCCACGAGGACAATTACCATACTCTTATCAAGTAGAAGACTGGTCAGAGAATAACCGTTACTCAAATGTGGCTTCAATGAAAAAACTAATCAACGAAGAAATATCCAAAGGATCAAGCACTAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATATGCTGCCACTGGACACTAAATCTGTTGTTCCATCAGAAAGAATAAGTGAAAATATGGGGAAGAAACTTTCAAGGAAGGGAATGAATGGAAATGGTTCAGTTAGTTGGGGTTCCTCCAACTTCAATTATTGTAACCAGATGGAATTAGACTCATTTTATGGAGACATAGATGATGATGGATGGAGCCAGAGTTTCGGAGAAGCGAGGCCACGAGAACATCCTCAGGAAGAGGAACTCCAGAAATTTAAGAAAGAGTTTCAAGCATATCAAGCAGCAAGGTTTGTGGAGTGTTCAAAGGTTGCTGATATTGGTCGTATGCCTAGACGATTAGTTGCTCATGAGAACCCGGACAATGAAAAGGTGGCACATAATGCAAATTCGCAGAGAGCAGCAAGAGAGAAACTTGCAGAATATGGTGGTGATATGGAGTTATTCCCAATTTTGTCAAAGCAAGCCTTTCCTTCGAGGAGTAGAACATTAAGTAGAGACTTTGAGGAGTGCTTAATGATGAAATCTAAAAACAGATTAGATAGATCTTCTTCTCCTACTCGAATAGTTATCTTGAAGCCTGGTCTTGATAGCATCTGCAACCATGACGGCAATTGGAGCAGTTCTTCAAGCAATTTACAAGGGAGGAATAGTATACAAGAATTTCTCGAGGAAGTGAAAGAACGGTTGAAATGTGAACTACAAGGGAAAACTGTCAAAAAAGGATCAGTGGTTCGAGGAAGTGGAATTGAGACACCTTACACAGAAAAACAATGTGATCCTAAACTAATAGCTCGTCATATAGTAAAACAGGCGACTAGAGATGCTGAATCAAATTTACCCCGCTCAGAATCAGGAAGATCATACACAAGTGAAATGCAGTTCGATGGACCAAGTTCCCCTGAGTTTATCAATAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGAAATGTTGTGAAAAGTGAAGCACATGTTGATATTCCCGAGGTGAATTTTAGAAACTCAAGGTTACATGCATTAAACGATCATAGAGTTAGAATAAAGCAAGCAGGAAATATTATCAAGTGTTCAAATGAGATGAACCACTCAAAAGAGGAAAAAGAAATACAAATAGGATCTTTCAGGCATGAATCAGAACCAGATGGCAATGTAATGTTCCACAACCACAGAGAGCTGTCGCCTAGGAACCTTTTAAGATCCCTGTCTGCTCCTGTATCAGGATCAGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGCCACATTTTAACCGGTGCTCAAATTCGGAGGAAGGTTGAAGCTGTGGAAAATAAATCTGTTGATGTTAAAAATCAGAGAAAAGATAGATTTAATATTAAAGAAAAAGTCTCCAATTTTAGATATGGTCTTGCTCTAAGAGGGAAGCTTTTTGGAAAAAAGAATCAATCAATAGTAGAATCACATGGCAATGAATATGTTTCAATGGTGAGAGATGTCACAAGTGGACCAACAGTTTTCATGAACCATGGTGATAGGCATGAGAACTCCACTGAGGTGCCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGAACTCTGGAGGCAGATTGGATATTTAAGTCCAATATCAACTCCAGATGTGTCTTCAAGAGATGATAACATTTTGCCCCATATTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAGGAAGCAACTCAGACAACTTGAGTCTGATGGTACCGAAGAATTCACGGCGAAACAAAAGGCTGAGCCCGTTGAGTTAGAATTAGTTCAAATAGAGGATCCAGCAGAATCTTACACAAGAGATCTACTTGTTGCCTCTGGTCTCTACTTCGGTTCATGGGATAAATCTTTACTAAGAGGGGACACATTTGCCAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGCTACTCATAAGAAATTGGGCAAGGACAGTAATAAGAGTTGTTTAAAGGATCAGAATGAGAAAAAGGTAGAGCACAAGATTTTACTTGATTTGTTAAATGAGGCACTTTCAGTAGTTCTTGGACCACCTTTGACATGGTCTAGATTCAGAAGGAAAATATGCAACTCTTCAATGATGCTACCACCATGTGGAAAGGAACTTTTGAACTTAGTGTGGGAAATTATCAGTGTTTCACTACATGATCCACATGATATATGTACTTATTCCCTTGATAGTTTGGTGGGTCAGTACTTGGAGTCCATCCCTTGA 2595 0.4008 MQVTCGIKLRLRTQESLGRPFVCMEGLLHFFEFNQGRMTKKVHSHKKQHGGMDAPRNSLDLQVETSQNHCPRGQLPYSYQVEDWSENNRYSNVASMKKLINEEISKGSSTRQNAPSLVARLMGIDMLPLDTKSVVPSERISENMGKKLSRKGMNGNGSVSWGSSNFNYCNQMELDSFYGDIDDDGWSQSFGEARPREHPQEEELQKFKKEFQAYQAARFVECSKVADIGRMPRRLVAHENPDNEKVAHNANSQRAAREKLAEYGGDMELFPILSKQAFPSRSRTLSRDFEECLMMKSKNRLDRSSSPTRIVILKPGLDSICNHDGNWSSSSSNLQGRNSIQEFLEEVKERLKCELQGKTVKKGSVVRGSGIETPYTEKQCDPKLIARHIVKQATRDAESNLPRSESGRSYTSEMQFDGPSSPEFINRDTRRFLSERLRNVVKSEAHVDIPEVNFRNSRLHALNDHRVRIKQAGNIIKCSNEMNHSKEEKEIQIGSFRHESEPDGNVMFHNHRELSPRNLLRSLSAPVSGSGTSFGKLLLEDRHILTGAQIRRKVEAVENKSVDVKNQRKDRFNIKEKVSNFRYGLALRGKLFGKKNQSIVESHGNEYVSMVRDVTSGPTVFMNHGDRHENSTEVPPSPASVCSSVHEELWRQIGYLSPISTPDVSSRDDNILPHIFRDISSGLNELRKQLRQLESDGTEEFTAKQKAEPVELELVQIEDPAESYTRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEATHKKLGKDSNKSCLKDQNEKKVEHKILLDLLNEALSVVLGPPLTWSRFRRKICNSSMMLPPCGKELLNLVWEIISVSLHDPHDICTYSLDSLVGQYLESIP 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0297 864 Pfam Domain of unknown function (DUF4378) 723 861 IPR025486 -
Lal15g0297 864 MobiDBLite consensus disorder prediction 394 423 - -
Lal15g0297 864 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 24 864 - -
Lal15g0297 864 MobiDBLite consensus disorder prediction 397 419 - -
Lal15g0297 864 Pfam DUF761-associated sequence motif 111 128 IPR032795 -
Lal15g0297 864 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 24 864 - -
Lal15g0297 864 Coils Coil 676 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0297 Lal-Chr15 1990625 1998113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0297 96 864 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.315 6.52e-144 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0297 - - gmx:100779720 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0355 16 2150700 2155803 Lal15g0297 15 1990625 1998113 LSH