Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0290 CTTGAGTACTTGACAATTATTCTTATTGTCCTGAAGAACAAAGATGCTGGCTATGTTGAAAATCAACAACAGAACATCGCTGATGCAATTGATTTGCTCCCTAGGCTTGCTACTGGTATTGATGTAAATATAAATTTTAGGAGAATAGATGATTTTGAGTTCACCCGAGAGTGTGCCATATTTGATCTTCTGGACATCCCTTTGTGTCATGGATGGATAGTTGATCCTCAGGAATTTTTGCTTACTGGTTTCTTGGTTATCTGCAACATGGATTATGATACTGCAAATGCACTAGGATCAAATTCCTATAATTCCCTTATGGGAGAGCTTGTTTCTCTTGAAACACTAAACATGGAAGTCCAACATAAAAGTAATCCCGAAGAAGATTGTGTTGATTTTGTGGCGGCCACAACTGCTGCTCTTGGAGTTCCTTCTCCCAGCCTTTCAAAACCCAGATCATTTGATGATCCTCCGGATTCTGTTTTGGATGAAATGCCAAGAAAAGGCAATCTGGAAGAAGAGGAAGAATTGTTTAGAGTTTTGGAGCTGTCTGAGAATGATTCTAAAGTTTCAGTGAGTGATGCGATTGTAGATCATGCAAATGGGGGAGCAATGTCCGTTAGTATGGATGAAGGTATGCATAACAAGCAGGTTGTACCTGTGGATTCTGGAGATAAATTAGAAAAGAGCACTGGTGCTGGCATAAATGGCTTCCGTGAGGCAACTGAACCTTCCATATCAGAGGATTGCCCAGATTCTGTCAAAAATATGGATGGTCAGATATCTTCTGCATCTATTCTGAGAGAAGCTGCTAGTTCAACCTTAAAGACAAATGCCATAAATGACCAACAATTACCTAATATGAGACCTGGAGAGTCTATTGACCAGAACGATGTGACTGAGAATGTTGGTCTTGATGCATCGGTTCAGAATGAGAGTGCAGCTATACTTTCTCCTGAAGAACACTCTGTCTCTTTGTCTGAGAGCTGTGCTGATGTGTCGGGAAGGGGTGGAAAAATTCACCATCAATCCACTCTCACTACTAGTGACCGTGCAGTTGTAGATGATTCTGAAGGATCCACTAGCTATACAAATTCAGATTCCTCTGGTGTCAGATTTCATCAAACTGATGTCTCTGGCGCATTGCCTTCAATTATTGATGATGGTGAGCCCATATATGAAGGAGAGGAATGTGTATTGGATACAAGAACTAAAAATCTTGAAGATCATGAACCTGTTTATGAAGGTGAGGTGGTGCTTGCAGAACAAGCTGAAAAAGGCATCTTAGCTGCCTCTGATCTAAGACCTAAGGATGAAATTACTCCACAACAAGGGGAATTGATGAAGACTTTTCTGAGGAATAATGCTAGTCAGTTGACATTTTACGGGTATGTTGACCTCTTGTTGCCTTTTCTGTTTACAGATGGCCTTAAAGAGCGTGAGATATGTGTTTTTTTCCGGAACAACCATTTCAGCACCATGTTTAAGTTTGAGGGTGAGCTATATCTTCTAGCTACAGACCAAGGTGACATAAATCAGCCTGATCTAGTGTGGGAAAAATTGAATGAGGTCAATGGCGATACGTTGTTTATGACCAGTAACTTGAAGGAATTCAAGGTAGAAGAAAGCCATGAAAGTAGCACCTGGAATGAGAACAATGTTATGACCAGCACCGCTGACTATCTTGCCAGCATGGATATCAAGAGTTTGAGCAGCAGCCGCCTCCACGTCATAGTTCACAGCAATCATCCATTAGTGGCAGCTCCAGACTGGTCACAGGCCCTCAGTCTCTTATATATTGAGTTATTAAGGAAGAAAATAATGCAAGAACCAAACTTAATAATGATGGGTAGTGGTGGTGGTGGAGTCGGCGGCGACCACCAACAACTGAAGGCGGAGATAGCCACTCATCCTCTATATGATCAGCTTCTAGCTGCACACGTAGCATGTCTCCGAGTTGCAACTCCCATAGATCAGTTATCACTGATTGATGACCAGTTATCACAGTCTCATAATATTCTTCGCTCTTATTTCTCTCAACAAAAAAATCATTCTCTTTCACAGCATGATAGCCAAGACCTTCATAACTTCCTGGCACAATATGTGATAGTGTTGTGTAGTTTGAAAGAAGAGCTTGAGGAACATGTTAGAGTTCATGCAGTGGATGCTGTCATGGCTTGCCGTCAAATTCAAAATACTTTACAAGCTCTCACAGGAGCAGGTTTGGGAGAAGGAAGTGGTGCAACAATGTCAGATGATGAAGAAGATGATATGCGAATGGAAATGTCATCATTAGATCAATCCAATGGTGAAGGGAATGACATAATGGGATTTGGTCCCTTACTTCCTACTCAATCTGAAAGGTCACTTATGGAAAGAATTCGTCAGGAACTCAAGATTGAGCTTAAGCAGGGTTTTAAGTCCAGAATTGAAGATGTTAGGGAAGAAATATTAAGGAAAAGAAGAGCTGGCAAATTACCTGGTGACACTACTTCCCTCTTAAAGAACTGGTGGCACCAACATGCCAAGTGGCCCTACCCAACTGAAGATGACAAGGTAAAACTTGTAGAGGAGACAGGGTTGCAGCTGAAGCAAATCAACAATTGGTTCATCAACCAAAGGAAACGCAACTGGCATAGCAACTCTCAATCTCTTACCTCTTTCAAGTCCAAGCGCAAGAGGTAG 2685 0.4164 LEYLTIILIVLKNKDAGYVENQQQNIADAIDLLPRLATGIDVNINFRRIDDFEFTRECAIFDLLDIPLCHGWIVDPQEFLLTGFLVICNMDYDTANALGSNSYNSLMGELVSLETLNMEVQHKSNPEEDCVDFVAATTAALGVPSPSLSKPRSFDDPPDSVLDEMPRKGNLEEEEELFRVLELSENDSKVSVSDAIVDHANGGAMSVSMDEGMHNKQVVPVDSGDKLEKSTGAGINGFREATEPSISEDCPDSVKNMDGQISSASILREAASSTLKTNAINDQQLPNMRPGESIDQNDVTENVGLDASVQNESAAILSPEEHSVSLSESCADVSGRGGKIHHQSTLTTSDRAVVDDSEGSTSYTNSDSSGVRFHQTDVSGALPSIIDDGEPIYEGEECVLDTRTKNLEDHEPVYEGEVVLAEQAEKGILAASDLRPKDEITPQQGELMKTFLRNNASQLTFYGYVDLLLPFLFTDGLKEREICVFFRNNHFSTMFKFEGELYLLATDQGDINQPDLVWEKLNEVNGDTLFMTSNLKEFKVEESHESSTWNENNVMTSTADYLASMDIKSLSSSRLHVIVHSNHPLVAAPDWSQALSLLYIELLRKKIMQEPNLIMMGSGGGGVGGDHQQLKAEIATHPLYDQLLAAHVACLRVATPIDQLSLIDDQLSQSHNILRSYFSQQKNHSLSQHDSQDLHNFLAQYVIVLCSLKEELEEHVRVHAVDAVMACRQIQNTLQALTGAGLGEGSGATMSDDEEDDMRMEMSSLDQSNGEGNDIMGFGPLLPTQSERSLMERIRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSLLKNWWHQHAKWPYPTEDDKVKLVEETGLQLKQINNWFINQRKRNWHSNSQSLTSFKSKRKR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0290 894 CDD homeodomain 820 881 IPR001356 GO:0003677
Lal15g0290 894 Gene3D - 816 889 - -
Lal15g0290 894 MobiDBLite consensus disorder prediction 144 165 - -
Lal15g0290 894 MobiDBLite consensus disorder prediction 335 372 - -
Lal15g0290 894 Pfam Homeobox KN domain 837 876 IPR008422 GO:0003677|GO:0006355
Lal15g0290 894 ProSiteProfiles 'Homeobox' domain profile. 817 880 IPR001356 GO:0003677
Lal15g0290 894 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 609 894 - -
Lal15g0290 894 SMART KNOX2_2 684 739 IPR005541 GO:0003677|GO:0005634
Lal15g0290 894 Pfam MINDY deubiquitinase 15 95 IPR033979 GO:0004843|GO:1990380
Lal15g0290 894 SMART KNOX1_2 628 672 IPR005540 GO:0003677|GO:0005634
Lal15g0290 894 MobiDBLite consensus disorder prediction 277 297 - -
Lal15g0290 894 Pfam KNOX2 domain 689 738 IPR005541 GO:0003677|GO:0005634
Lal15g0290 894 MobiDBLite consensus disorder prediction 340 372 - -
Lal15g0290 894 SMART HOX_1 819 884 IPR001356 GO:0003677
Lal15g0290 894 SUPERFAMILY Homeodomain-like 819 884 IPR009057 -
Lal15g0290 894 ProSiteProfiles ELK domain profile. 797 817 IPR005539 GO:0003677
Lal15g0290 894 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 609 894 - -
Lal15g0290 894 Pfam KNOX1 domain 630 671 IPR005540 GO:0003677|GO:0005634
Lal15g0290 894 MobiDBLite consensus disorder prediction 223 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0290 Lal-Chr15 1948613 1956803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0290 608 893 Homeobox Transcription Factor Family AT1G62990 72.542 6.69e-146 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0290 K01309 - gmx:100808340 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0290 15 1948613 1956803 Lal15g0290 15 1948613 1956803 ECH