Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0280 ATGGATCCACTTTCAGCGCATGGACACTCTCTTCCCCCTCCTTTCCACTCAAGAGATTTTCATCTCCACCAGCAGCAGCAGCAACAACAACAATTCCACGCTTTACAGCAAAACACAGAAGATTCTCAAAGCGAAAGCAGCGGTGGGCTAAACCTCAAAAGGGAGCGCGATGAAAACAACAATAGTGAAGGGAAAGAACTCGCTGGTGAAACTGAGATGTCAAGAAGACCTAGAGGAAGACCAGCTGGATCCAAAAACAAACCAAAGCCACCCATCATCATCACACGTGACAGTGCCAATGCCCTAAAAACGCACGTGATGGAAGTCGCCGACGGTTGCGACATCATAGAAAGTGTCTCCAACTTCGCTAGGCGTCGCCAGAGAGGTGTTTGCATCATGTCCGGCACTGGAACGGTTACTAATGTAACTCTTCGGCAACCAGCTTCTTCTGGTGCTGTAGTCACCCTTCATGGAAGGTTCGAGATCTTGTCCCTCTCTGGATCCTTCCTCCCACCACCTGCTCCGCCCGCTGCATCGGGTTTGACCATATATTTGGCGGGCGGACAAGGACAGGTAGTGGGAGGAAGTGTTGTAGGGACACTATTAGCTTCGGGTCCGGTGGTGATTATCTCGGCTTCATTTAGTAACGCTGCTTATGAGAGGCTACCTTTGGAAGAAGATGATCCTTCTTCACTTCCACTTCAAGGTGGTGGTGGTTCGATTGAGTCCTCGAGTGCTGGTGGTAGCTGTGGTGGAGTTGGTGGTCAACAACAGCAACATCAGAATCAGCTTTTAGGAGATTCAACTGCTCCACTTTTTCATGGTTTGCCTCCAAATCTTCTCAATTCTGTTCAGATGCCTTCAGAAGCATTCTGGAATACTGGTCGCTCTCCATACTGA 900 0.4933 MDPLSAHGHSLPPPFHSRDFHLHQQQQQQQQFHALQQNTEDSQSESSGGLNLKRERDENNNSEGKELAGETEMSRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIIESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLLASGPVVIISASFSNAAYERLPLEEDDPSSLPLQGGGGSIESSSAGGSCGGVGGQQQQHQNQLLGDSTAPLFHGLPPNLLNSVQMPSEAFWNTGRSPY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0280 299 PIRSF ESCAROLA 13 298 IPR014476 GO:0003680
Lal15g0280 299 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 299 IPR014476 GO:0003680
Lal15g0280 299 MobiDBLite consensus disorder prediction 236 268 - -
Lal15g0280 299 MobiDBLite consensus disorder prediction 20 49 - -
Lal15g0280 299 MobiDBLite consensus disorder prediction 226 269 - -
Lal15g0280 299 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 299 - -
Lal15g0280 299 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 216 IPR005175 -
Lal15g0280 299 Gene3D - 102 235 - -
Lal15g0280 299 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 230 - -
Lal15g0280 299 CDD DUF296 103 170 IPR005175 -
Lal15g0280 299 ProSiteProfiles PPC domain profile profile. 99 235 IPR005175 -
Lal15g0280 299 MobiDBLite consensus disorder prediction 50 79 - -
Lal15g0280 299 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0280 Lal-Chr15 1896048 1896947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0280 1 299 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 59.813 9.46e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0280 - - lang:109348923 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0280 15 1896048 1896947 Lal15g0280 15 1896048 1896947 ECH