Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0257 ATGGTGAAAATAGCTTTTGGTAGCTTTGATGACTCTTTTAGTGTTACCTCCATAAAGGCTTATCTTGCAGAGTTCCATGCTACTCTCATTTTCGTGTTTGCTGGTGTTGGATCAGCCATTGCTTACATAATAGCACAAAATTGTTGGTGTATAGATGAAGTTACAAAAGATGCAGCATTGGATCCAGCTGGGCTTGTAGCAGTAGCATTGGCCCATGCATTTGCACTATTTGTGGGTGTTTCCATTGCAGCCAACATTTCTGGTGGCCATTTGAACCCAGCTGTCACATTTGGATTGGCTATTGGAGGCAACATCACTATCCTCACTGGTCTCTTCTACTGGATTGCCCAATTGCTTGGCTCTATTGTTGCATCTCTACTCCTCTCTTTTGTCACCTCTAAGAGCATTCCAACCCATGGAGTTGCTTCTGGAGTGAACGCATTAGGAGGTGTAGTGTTCGAGATTATTATTACATTTGGATTGGTGTACACTGTGTATGCTACAGCAGTTGACCCTAAAAAGGGTTCATTGGGAACTATTGCACCCATTGCTATTGGGTTCGTTGTGGGTGCAAACATCTTAGCTGCTGGTCCTTTCAGTGGTGGTTCAATGAACCCGGCTCGATCATTTGGCCCAGCTGTGGTTAGTGGAAACTTCGCTGAAAACTGGATCTATTGGGTTGGCCCATTGATTGGTGGAGGCTTGGCTGGGTTGATCTATGGTGGCATCTTCATTGGTTCCTATGCCCCTGTCCCGGCCACTGAAACCTATCCTTAA 777 0.453 MVKIAFGSFDDSFSVTSIKAYLAEFHATLIFVFAGVGSAIAYIIAQNCWCIDEVTKDAALDPAGLVAVALAHAFALFVGVSIAANISGGHLNPAVTFGLAIGGNITILTGLFYWIAQLLGSIVASLLLSFVTSKSIPTHGVASGVNALGGVVFEIIITFGLVYTVYATAVDPKKGSLGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFAENWIYWVGPLIGGGLAGLIYGGIFIGSYAPVPATETYP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0257 258 SUPERFAMILY Aquaporin-like 16 248 IPR023271 -
Lal15g0257 258 Gene3D Glycerol uptake facilitator protein. 2 250 IPR023271 -
Lal15g0257 258 CDD MIP 19 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 Pfam Major intrinsic protein 14 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Lal15g0257 258 TIGRFAM MIP: MIP family channel proteins 23 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 PRINTS Major intrinsic protein family signature 153 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 PRINTS Major intrinsic protein family signature 186 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 PRINTS Major intrinsic protein family signature 223 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal15g0257 258 PANTHER AQUAPORIN-8 1 258 IPR034294 -
Lal15g0257 258 PANTHER AQUAPORIN TIP2-2-RELATED 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0257 Lal-Chr15 1755316 1757250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0257 1 255 Major Intrinsic Protein MIP AT5G47450 75.391 1.95e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0257 K09873 - fve:101300912 400.208