Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0249 ATGGCCCAAGGAAGAAGCAATAGTGCAGTGATAGCTCTAATGCTACTATTATGTATGTTGGTGTTTCACTCTGAGATAGTTCATGCAACTACATTCCAAGTTGGTGATGCTGGTGGTTGGACCTTCGAAGTATCAAACTGGCCTTCTGGAAAAACATTCAAGGCTGGTGATATACTTGAATTTAATTATAAAGTCAATGAACACAACTTGGTGGTAGTGAATGAGGGTGGTTACAATTCTTGCACTGGTTCAGGCAAAGTGTATAATTCGGGAAAGGATCAAATCAAGTTGGTCAAAGGAAAGAACTACTTCATTTGTAGTCTACCTGGTCACTGCCAGAGAGGGATGAAGATTGCAGTTTCTGCTGCATAA 372 0.4059 MAQGRSNSAVIALMLLLCMLVFHSEIVHATTFQVGDAGGWTFEVSNWPSGKTFKAGDILEFNYKVNEHNLVVVNEGGYNSCTGSGKVYNSGKDQIKLVKGKNYFICSLPGHCQRGMKIAVSAA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0249 123 PANTHER BLUE PROTEIN, PUTATIVE-RELATED 8 121 - -
Lal15g0249 123 PANTHER BLUE COPPER PROTEIN 8 121 IPR039391 GO:0009055
Lal15g0249 123 Gene3D - 30 122 IPR008972 -
Lal15g0249 123 CDD Plantacyanin 30 122 IPR041844 -
Lal15g0249 123 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Lal15g0249 123 Pfam Plastocyanin-like domain 41 116 IPR003245 GO:0009055
Lal15g0249 123 ProSiteProfiles Phytocyanin domain profile. 30 123 IPR003245 GO:0009055
Lal15g0249 123 SUPERFAMILY Cupredoxins 31 121 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0249 Lal-Chr15 1695504 1696001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0249 11 122 Phytocyanin Superfamily AT1G17800 40.833 7.64e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0249 - - pop:7486687 167.548