Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0221 ATGGAAGGAGCATCACTGCCTCCAGGTTTTCGTTTCCATCCAACTGATGAAGAACTTGTTGGTTATTACTTGAAAAGAAAAGTAGAAGGGCTTCAAATTGAGCTTGAAGTGATTCCTGTCATCGATTTCTACAAATTCGATCCCTGGGAGTTACCAGAGAAATCGTTCTTACCAAATAGAGATTTGGAATGGTTTTTCTTTTGTCCAAGGGATCGCAAGTATCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACTGGAAAAGACAAGAAGGTTGTCTGTCAATTTAGTCCATCCACATCCACTACAACCTCCGTTGTCACTGGTTACCGCAAAACACTTGTTTTCTATCGTGGAAGGGCCCCTTTAGGAGATCGAACCAATTGGGTCATGCATGAGTATCGCCTCTGCGATGATCTTGCCCAACCCTCACCATCTTTTCGGGGTGCTTTCGCTTTATGCCGGGTTACTAAGAAGAATGAGAAGGTCAATGACTTCCAAGGAGAATTACATAAGTGTAAAAGAGTTGCAGGGAGCAGTTCCAGCAATGGGAATGAGAGCTCAATGAAACTGAGTTTGTCCAATGAGCTCTTAAGTATCTCTGGTGAGATTTCTTGTCAAGCAAGTAAGATGTGCAATGAGAGTCTTGATTCAAGTCCTATTGGTTCTCCTTCTCCATACAATAATGTTGCTCCAATGCCCTCCATGGACACCAATCCTGATATGATTCTTGACTCTTCAAAGGAATACTGTAAAGCACAAGATGTTGAACATGGATACTTTCCACAGCATGATTTAAGCACAATGACACCATTGGATTACACAGATATTTCATCCAGTTCATCCTACTCAAATTTGAATAGGGAAATTGAACTTTGTGATGATCTGATTCGAAATGGATGCATGTCACCTTATGAATTGTTGTATCGGTAG 951 0.4143 MEGASLPPGFRFHPTDEELVGYYLKRKVEGLQIELEVIPVIDFYKFDPWELPEKSFLPNRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQFSPSTSTTTSVVTGYRKTLVFYRGRAPLGDRTNWVMHEYRLCDDLAQPSPSFRGAFALCRVTKKNEKVNDFQGELHKCKRVAGSSSSNGNESSMKLSLSNELLSISGEISCQASKMCNESLDSSPIGSPSPYNNVAPMPSMDTNPDMILDSSKEYCKAQDVEHGYFPQHDLSTMTPLDYTDISSSSSYSNLNREIELCDDLIRNGCMSPYELLYR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0221 316 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 309 - -
Lal15g0221 316 Pfam No apical meristem (NAM) protein 7 142 IPR003441 GO:0003677|GO:0006355
Lal15g0221 316 ProSiteProfiles NAC domain profile. 6 165 IPR003441 GO:0003677|GO:0006355
Lal15g0221 316 SUPERFAMILY NAC domain 4 165 IPR036093 GO:0003677|GO:0006355
Lal15g0221 316 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 309 - -
Lal15g0221 316 Gene3D NAC domain 15 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0221 Lal-Chr15 1497803 1500367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0221 1 312 NAC Transcription Factor Family AT4G17980 52.229 8.15e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal15g0221 NAM 3.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0221 - - adu:107487585 429.098