Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0216 ATGGCTGGTTTAGATTTAGGTACAGCTTCACGTTTTATACAAAATCTCCAAAGACCAGATTTCAACTTGCAACAACAAACTGAATCAGAGGAAGACGGAAACCAAGGTGATCCTTACGAAGATGGACCCAACCAAGGGCTCGAGCTCGGTTCCGGGGGCGACATGGTTAAGCGCCGTCCACGTGGTCGTCCAGCTGGCTCCAAGAACAAGCCCAAACCTCCGGTTATTATAACAAAGGAAAGTGCCAACACGCTCAGGGCTCATATTCTCGAAGTTGGAAATGGCTGCGACGTTTTCGACTGCGTCGCCACCTACGCACGGCGTAACCAGCGCGGGATCTGTATCCTTAGCGGCAGTGGCACCGTCACTAACGTTAGTTTGCGGCAGCCTGCAGCGGCTGGATCCGTCGCCACCCTTCACGGAAGGTTTGAGATATTGTCACTGTCCGGGTCCTTCCTCCCGCCACCGGCTCCGCCGGGGGCGACGAGCCTGACTATATACCTCGCCGGAGGTCAGGGTCAAGTGGTGGGAGGGAGTGTGGTTGGAGAGTTGACCGCGGCTGGGCCTGTGATTGTGATTGCTGCTTCTTTCACCAACGTGGCTTATGAGCGGTTACCTTTGGATGAGGAAGAAAATCATCAATTACAGACACCTACACAAGGCGGTGGTCAAGGTTCTTCCGGTGGTGGTGGTGTGGGGAACAGCAACAACCCATTTCCGGACCCGTCATCGGGGCTGCCGTTCTTTAATTTGCCGGTGAATATGCCAAATATTCAGTTGCCAGTGGATGGTTGGGCGGGAAACTCAGCTTCACGTCCTTCCTTTTGA 828 0.5399 MAGLDLGTASRFIQNLQRPDFNLQQQTESEEDGNQGDPYEDGPNQGLELGSGGDMVKRRPRGRPAGSKNKPKPPVIITKESANTLRAHILEVGNGCDVFDCVATYARRNQRGICILSGSGTVTNVSLRQPAAAGSVATLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEEENHQLQTPTQGGGQGSSGGGGVGNSNNPFPDPSSGLPFFNLPVNMPNIQLPVDGWAGNSASRPSF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0216 275 Gene3D - 85 220 - -
Lal15g0216 275 MobiDBLite consensus disorder prediction 214 243 - -
Lal15g0216 275 ProSiteProfiles PPC domain profile profile. 82 219 IPR005175 -
Lal15g0216 275 MobiDBLite consensus disorder prediction 10 32 - -
Lal15g0216 275 PIRSF ESCAROLA 7 275 IPR014476 GO:0003680
Lal15g0216 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 275 - -
Lal15g0216 275 MobiDBLite consensus disorder prediction 214 245 - -
Lal15g0216 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 199 IPR005175 -
Lal15g0216 275 MobiDBLite consensus disorder prediction 1 76 - -
Lal15g0216 275 CDD DUF296 86 169 IPR005175 -
Lal15g0216 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 215 - -
Lal15g0216 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 275 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0216 Lal-Chr15 1474410 1475237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0216 1 275 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.246 4.93e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0216 - - jre:108994023 410.994