Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0202 ATGCTTTCTGCTCTTTCAGCTAATGATCCTCTGCTTTCAAACCTTTTCTATGCGGCGTTCGACGGTGGTTACACGCCGTGGGACTTCCCTGAATTTTTCCTAGCCCCACCCACCACCCCCAAACCAGTTACTTCAAGCACCGGTTCTGACGAACCTGACCAAACCCTTGCCAAACTAAAACCGGAATCAGACTACTCTGACCGTGGCGTAACCATTGTGGAGGAGCGTAAGCGGAGGCGAATGGTGTCGAACCGTGAATCGGCTCGGAGATCACGTATGCGTAAACAGAGGCATCTAGAGAACTTACGGAACCAGTTGAACCTGTTTAGGGTGAAAAACCGGGAACTGAACACCCAGTTGCAGATACTGCATAACCACTGTGACCAAGTGCGAGCCGAAAACGATTGGCTTCGGTCCGAGCGAACCCTGCTCTGTCAAAAACTGTCCAACATAACTCAATTTATGGCTTTCCAATAA 477 0.499 MLSALSANDPLLSNLFYAAFDGGYTPWDFPEFFLAPPTTPKPVTSSTGSDEPDQTLAKLKPESDYSDRGVTIVEERKRRRMVSNRESARRSRMRKQRHLENLRNQLNLFRVKNRELNTQLQILHNHCDQVRAENDWLRSERTLLCQKLSNITQFMAFQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0202 158 PANTHER BZIP TRANSCRIPTION FACTOR 28 158 - -
Lal15g0202 158 Pfam bZIP transcription factor 76 134 IPR004827 GO:0003700|GO:0006355
Lal15g0202 158 Gene3D - 74 129 - -
Lal15g0202 158 SUPERFAMILY Leucine zipper domain 76 127 IPR046347 GO:0003700|GO:0006355
Lal15g0202 158 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Lal15g0202 158 MobiDBLite consensus disorder prediction 39 53 - -
Lal15g0202 158 MobiDBLite consensus disorder prediction 38 65 - -
Lal15g0202 158 CDD bZIP_plant_GBF1 77 128 IPR045314 GO:0003700|GO:0006355
Lal15g0202 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Lal15g0202 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 137 IPR004827 GO:0003700|GO:0006355
Lal15g0202 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 28 158 - -
Lal15g0202 158 Coils Coil 85 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0202 Lal-Chr15 1393228 1393704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0202 1 157 bZIP Transcription Factor Family AT3G49760 38.650 9.03e-27 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal15g0202 bZIP_1 6.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0202 - - lang:109332688 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0202 15 1393228 1393704 Lal23g1280 23 13878253 13878780 LSH