Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0198 ATGGCTGCTAGTAGTCCAAAGCCACCGGTGTCTCTGAAAAACTTAGGAGAAACTTGGCATTCACGTTCTACAACTTCTGAACAGTTCTTGAGTTATGGTACAAGAGTGAGAACTGGAAGGTTCAGTTGTGATTGTGTTTCCAGGTTACAAAGGAGAAGAATGGCAGAGTTTTTGGTGAAATCTGGGTGCTGGTGTGACCAAGCTAGTAGTCCTTACGACTATGGTGTAACAGAGGAAGACAAAGAGTTCGTGAAGGTTCTTTGGGAAGCACAACCTTATGTTGCAGTGCATAGGGATAGTGTATTTGTTGTAGTCATCTCTGCAGAAATTGTTGCTAGTCCTTACTTAGATCCCATTCTCAAGGATATAGCATTCCTTCATCACCTGGGAATTCGGTTTGTTCTTGTTCCAGGAACTCATGTTCAAATAGACAAGCTTCTGAAGGAGAGAGGGAGCCAGCCTAAGTATGTTGGTAGATATAGAATAACAGATGATGAATCTCTAGCTGCTGCAATGGAAGCTGCAGGGGGGATAAGATTGATGATTGAAGCAAAACTTTCTCCTGGGCCCTCCATATGCAATATTCGTCGACATGGTGACAATAGCCGCTGGCACGAAGTCGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCCGCCAAGAGAAGAGGGGTTGTCAGTGGAATTGATTTTGGGTCAACTGGAGAAGTTAAAAAAGTAGATGCTTCTCGAATGCGTGAAAGGCTTGATGGTGGTTGTGTAGTTATTTTAAGCAACTTGGGCTACTCTAGCTCTGGAGAAGTATTAAATTGCAACGCATATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCTGACAAGTTAATATCTATTATAGATGGCCCTATACTTGATGAGAGTGGACGCCTAATTCGTTTTTTGCCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGAGCTGCCCAAAGTGAAACAGCTGCTAACTATGTAAAAGCTGTTGATGAAGAAGATTTCAACTCTCTTGAGCATAACCATTTTAATGGGACAGTCCAATATCCACCCAATGGGAAACCTTCTACAGAATGGAATAATGTAACCTTTCATAATGGTGTTGGTTTTGACAATGGAAATGGCCTAGGGTCTGGTGAGCAAGGATTTGCTATTGGAGGTCAAGAGAGGCTAAGTCGAATGAATGGTTATCTCTCAGAATTGGCAGCTGTGGCTTTTGTTTGTAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTATTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACGATGGTCGCTAGTGACCTTTATGAAGGCACACGAATGGCACAGATAACAGATATTTCTGGAATAAAACAAATTATTCAGCCCTTGGAGGTATCTGGCGTATTGGTTAAACGGACTGATGAAGAGCTTCTAAAATCTTTGGATAACTTCATTGTTGAGGAAAGAGAAGGTCAAATAATTGCTTGTGGTGCACTTTTTCCTTTTTTTGAGGAGAAGTGTGGAGAGGTTGCTGCTATTGCAGTATCTCCTGATTGTCGCGGCCAAGGACAGGGAGACAAGTTGCTTGATTATATGGAGAATAAAGCATCATCTCTTGGATTAAATATGCTTTTTCTACTTACTACTCGCACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTGTATTCCTGAAAAGAGGAGGAAAATGATCAACCTGTCCCGTAATTCTAAGTATTATATGAAGAAGCTTCTACCAAACAGAAGTGGAATTATTGTTGGTAGAAAATATGCTTCAAAATAG 1836 0.4139 MAASSPKPPVSLKNLGETWHSRSTTSEQFLSYGTRVRTGRFSCDCVSRLQRRRMAEFLVKSGCWCDQASSPYDYGVTEEDKEFVKVLWEAQPYVAVHRDSVFVVVISAEIVASPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLKERGSQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVSGIDFGSTGEVKKVDASRMRERLDGGCVVILSNLGYSSSGEVLNCNAYEVATACALAIGADKLISIIDGPILDESGRLIRFLPLQEADMLIRKRAAQSETAANYVKAVDEEDFNSLEHNHFNGTVQYPPNGKPSTEWNNVTFHNGVGFDNGNGLGSGEQGFAIGGQERLSRMNGYLSELAAVAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQITDISGIKQIIQPLEVSGVLVKRTDEELLKSLDNFIVEEREGQIIACGALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYMENKASSLGLNMLFLLTTRTADWFVRRGFSECSIDCIPEKRRKMINLSRNSKYYMKKLLPNRSGIIVGRKYASK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0198 611 Pfam Amino acid kinase family 115 316 IPR001048 -
Lal15g0198 611 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 449 597 IPR000182 GO:0016407
Lal15g0198 611 Gene3D - 81 448 IPR036393 -
Lal15g0198 611 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 452 598 IPR016181 -
Lal15g0198 611 Hamap Amino-acid acetyltransferase [argA]. 82 595 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal15g0198 611 SUPERFAMILY Carbamate kinase-like 80 319 IPR036393 -
Lal15g0198 611 SUPERFAMILY Carbamate kinase-like 397 445 IPR036393 -
Lal15g0198 611 PANTHER AMINO-ACID ACETYLTRANSFERASE 77 605 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal15g0198 611 Gene3D - 449 595 - -
Lal15g0198 611 Pfam Acetyltransferase (GNAT) family 489 554 IPR000182 GO:0016407
Lal15g0198 611 PANTHER AMINO-ACID ACETYLTRANSFERASE NAGS2, CHLOROPLASTIC-RELATED 77 605 - -
Lal15g0198 611 CDD AAK_NAGS-ABP 82 443 IPR033719 -
Lal15g0198 611 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 404 595 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal15g0198 611 CDD NAT_SF 490 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0198 Lal-Chr15 1360302 1367008 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal15g0198 AA_kinase 5.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0198 K14682 - gmx:100777694 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0262 16 1570742 1576629 Lal15g0198 15 1360302 1367008 LSH
Lal15g0198 15 1360302 1367008 Lal23g1287 23 13912484 13918400 LSH