Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0193 ATGGGGAGCTCTGGTATCTTCATTTCTTTGTCTAGTCTTATGTGTGATGAAGGTGAAGGTAGCTTCTTTGAAGATGTTGAAAACACTAGCATTGATTCACTTTATAACCCATCTTTCGTTTTGGATGATGAAGAGGAATACATTGAATATTTGTTCACACAAGAAATGGGGTTCGGATCCCAGAGTCATCATGTTTTCTCATCTAATCATGGTTGCTCAGAAAGATTATGGTTGAGAAGTGCTCGTCTTGATGCTATTGATTGGATTTTCAATACTCAGGTGAAATTTGGATTCAAAGTTCACACAGCTTACTTATCAATGACTTACTTTGATCAATTCCTTTCAAAGAGATCCATTGATGAATCCAAACCTTGGGCTATTAAGTTATTATTAGTGGCATGTTTATCTCTGGCAGCAAAGATGGAAGAGCAAAATGTGCCACCACTATTTGAATATCCAACAGAAGAATGTCGCTTTGAGAGCAAAGTGATTAAGAATATGGAGCTGATGATTTTGAGTACATTGGAATGGAAAATGGGATCAGTAACACCTTTTCCTTATCTGCATTACTTTGTGAGCAAGTTCTTCCCTGAATCCAGACCAGAAATTATAATCATAAAAGCCACTGAACATATTGTGAACATGGTCAAAGATATTAATTTGATGGATCAACGGCCATCAATTATCGCTTCAGCTGCTGTTATGGCAGCTTTTGATGCTACATTAACAAGAAATATCATGGACCATATGTTAAGTGCAATCTCGTCATGGGGAAATATAGAAAGGGAGAAGAAAAACATAGTTAAGACCCCTTCCTCGAATCTATTGTCCACCCATTCAAGCTCCACGTGTGTTGTTGAGAACCCATTTGACACTTCTTCAGGAACCAAGAGAAAACTTACTTTTCAGAACAGTGAAAATAGTCCAAGACAAAAGCTACATCGACCATAG 951 0.3754 MGSSGIFISLSSLMCDEGEGSFFEDVENTSIDSLYNPSFVLDDEEEYIEYLFTQEMGFGSQSHHVFSSNHGCSERLWLRSARLDAIDWIFNTQVKFGFKVHTAYLSMTYFDQFLSKRSIDESKPWAIKLLLVACLSLAAKMEEQNVPPLFEYPTEECRFESKVIKNMELMILSTLEWKMGSVTPFPYLHYFVSKFFPESRPEIIIIKATEHIVNMVKDINLMDQRPSIIASAAVMAAFDATLTRNIMDHMLSAISSWGNIEREKKNIVKTPSSNLLSTHSSSTCVVENPFDTSSGTKRKLTFQNSENSPRQKLHRP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0193 316 MobiDBLite consensus disorder prediction 287 309 - -
Lal15g0193 316 Gene3D - 181 256 - -
Lal15g0193 316 Gene3D - 78 180 - -
Lal15g0193 316 PANTHER CYCLIN-D5-1 70 257 - -
Lal15g0193 316 SUPERFAMILY Cyclin-like 36 179 IPR036915 -
Lal15g0193 316 Pfam Cyclin, N-terminal domain 49 179 IPR006671 -
Lal15g0193 316 PANTHER CYCLINS 70 257 IPR039361 -
Lal15g0193 316 CDD CYCLIN 82 172 IPR013763 -
Lal15g0193 316 SMART cyclin_7 87 173 IPR013763 -
Lal15g0193 316 MobiDBLite consensus disorder prediction 287 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0193 Lal-Chr15 1329221 1331041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0193 9 261 Core Cell Cycle Gene Families AT4G37630 34.831 4.11e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0193 K18811 - gmx:100798140 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0193 15 1329221 1331041 Lal15g0193 15 1329221 1331041 ECH
Lal16g0255 16 1531804 1541709 Lal15g0193 15 1329221 1331041 LSH