Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0192 ATGGATAGCAGTTGTTGCAAATCTTTCAGCAAAACCAACAGTCTCACTCCAGCACCACCTACTTTACCTCCAGCAGCAAACGTTTGTTCCTCTAAGTGTCTGCTGAAGAATAATTACGCATCAAGAGGGCGCAGCTATGTCTCTTCAGCAACAAAAGATCTTTGGGGGCGTCTTTTTTATGAAGGTTATAAGGCAGATGCTTGCATTAATACTGAAAACGGTGGTGTTCTTTATGCCCATTCTAACATTCTTGCCATGGCTTCTCCTGTAATAAGGGGCATGCTGAAGCAAGCTAAACGTCTTGACCAGTGGCGATCAATCTCAATCTCTGGGGTTCCACATGATGCAGTTCGAGCTTTTATCCAATTCTTGTACTCTTCTTGTTACGAGAAAGAAGAAATGGAGGAATTCATCCTACCCTTGTTAGTGCTGTCACATGTATTTGTGGTCCCTCACTTGAAGAGCGAATGTGAACAGAAGCTAGAGTTGGATTTACTCACAATAGATAATGTAGTTGATGTATTTCAACTTTCATTACTATGCGATGCTCCACGTCTCAGCCTCATTTGTCACCGTATGATGCTAAAAAATTTCAAAGCTGTTTCAGAGTCAGACGGATGGAAAGCAATGAAACAGAGCCACCCAGTTTTAGAAAAGGGAGTTCTACTGTCTGTGGCAGAAGAAGAAAATGCAAAAAGTGAGAGGCTCAGAAAATTGAATGAAAGGAAGACCTATCTGCAATTATATGAAGCAATGGAAGCTCTTGTTCATATATGTAGAGATGGCTGTAGAACCATTGGTCCTCATGATAAAGACTTCAAAGCAAACCAGCCATGTCGATATACAGCATGCAAGGGACTAGAATTGCTTGTTCGTCATTTTGCTGGCTGCAAACCAAGAGTCCCAGGAGGCTGTGTTCACTGCAAGAGAATGTGGCAACTTTTGGAGCTACACTCCAGACTTTGTGCTGATCCAGATTATTGCAAAGTTCCTTTGTGCAGGAACTTTAAGCAGAGGATATTAAAACAAACCAAGAAAGACGAAATTCGATGGAAAATATTGGTCGAAAAGATCTTGAGAACAAGAGGCGTTGGAATAGCGCCATGGTTTCGGCCACAATAG 1122 0.4198 MDSSCCKSFSKTNSLTPAPPTLPPAANVCSSKCLLKNNYASRGRSYVSSATKDLWGRLFYEGYKADACINTENGGVLYAHSNILAMASPVIRGMLKQAKRLDQWRSISISGVPHDAVRAFIQFLYSSCYEKEEMEEFILPLLVLSHVFVVPHLKSECEQKLELDLLTIDNVVDVFQLSLLCDAPRLSLICHRMMLKNFKAVSESDGWKAMKQSHPVLEKGVLLSVAEEENAKSERLRKLNERKTYLQLYEAMEALVHICRDGCRTIGPHDKDFKANQPCRYTACKGLELLVRHFAGCKPRVPGGCVHCKRMWQLLELHSRLCADPDYCKVPLCRNFKQRILKQTKKDEIRWKILVEKILRTRGVGIAPWFRPQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0192 373 CDD BACK 167 210 - -
Lal15g0192 373 Gene3D - 167 240 - -
Lal15g0192 373 Pfam TAZ zinc finger 249 333 IPR000197 -
Lal15g0192 373 SUPERFAMILY TAZ domain 242 340 IPR035898 -
Lal15g0192 373 SMART BTB_4 65 165 IPR000210 GO:0005515
Lal15g0192 373 ProSiteProfiles BTB domain profile. 65 133 IPR000210 GO:0005515
Lal15g0192 373 Pfam BTB/POZ domain 64 162 IPR000210 GO:0005515
Lal15g0192 373 ProSiteProfiles Zinc finger TAZ-type profile. 239 336 IPR000197 -
Lal15g0192 373 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 6 371 - -
Lal15g0192 373 Gene3D Potassium Channel Kv1.1; Chain A 37 166 IPR011333 -
Lal15g0192 373 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 371 IPR044513 -
Lal15g0192 373 SUPERFAMILY POZ domain 48 161 IPR011333 -
Lal15g0192 373 Gene3D TAZ domain 241 361 IPR035898 -
Lal15g0192 373 SMART TAZ_2 242 334 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0192 Lal-Chr15 1321399 1325484 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lal15g0192 BTB 1.8e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0192 - - lja:Lj2g3v1968190.1 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0192 15 1321399 1325484 Lal15g0192 15 1321399 1325484 ECH