Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0190 ATGAGTTGCAACGGGTGCAGAGTCCTTCGTAAGGGTTGCAGCGAGTCTTGTATTTTACGACCTTGTCTTCAGTGGATCAACACTCCCGAAGCCCAAGGTCATGCTACTCTTTTCGTTGCCAAATTTTTCGGTCGTGCTTGTCTCATGTCTTTCATTTCCAACGTCCCTCAAATTCAAAGAACTGCTTTGTTTCAATCTCTGTTATTCGAAGCGTGTGGACGAACAATTAACCCAGTCAATGGCGCTGTTGGGCTTCTTTGGACCGGTAACTGGCACGTGTGTAAGGCGGCGGTTGAGACTGTTCTCCGTGGCGGCATCCTGAGGTCCATGCCGGAGTTCCTTGCCATTGACGCGCCCACTCCCACTTCCGATGACGCATCCGAAGGGGAAGTTACTTGCACCAACATGTGGAGGTTGCGAGATCCGAACCCGAATTTCCGGTTCACCAGTTCAAGTTCTAAGGTCCCTTCTGGCGGAAAACGCAAACGATCGGAGGAAATCGATGATCTCAATCTCCGATTGACGCTAAGTTTGTTGCAGAACTCGCAAGCGTACAGTTGCCGACGAGATATTCGGCGGCCAGGCACGCCATCGATGAATTGTGAGGAGTCCGTGACGACGGCGACATGGTTGGATAGCGGGCTCGATGGTTACGCTGACGACGGTGGCAGAAAAGTCCTCAACCTTTTCGTTTGA 696 0.5158 MSCNGCRVLRKGCSESCILRPCLQWINTPEAQGHATLFVAKFFGRACLMSFISNVPQIQRTALFQSLLFEACGRTINPVNGAVGLLWTGNWHVCKAAVETVLRGGILRSMPEFLAIDAPTPTSDDASEGEVTCTNMWRLRDPNPNFRFTSSSSKVPSGGKRKRSEEIDDLNLRLTLSLLQNSQAYSCRRDIRRPGTPSMNCEESVTTATWLDSGLDGYADDGGRKVLNLFV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0190 231 MobiDBLite consensus disorder prediction 144 164 - -
Lal15g0190 231 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Lal15g0190 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 231 - -
Lal15g0190 231 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lal15g0190 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0190 Lal-Chr15 1309593 1310825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0190 1 231 AS2 family AT5G67420 54.297 5.97e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal15g0190 LOB 7.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0190 - - lang:109332579 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0190 15 1309593 1310825 Lal16g1328 16 9536038 9537466 ECH
Lal15g0190 15 1309593 1310825 Lal15g0190 15 1309593 1310825 ECH