Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0180 ATGTCTCTCAGACGACAACAACAACAACAACAACACTCTTCCTCCTTGTTCCTCTGTGAAGAACAGCCACACACTTTGGATTTAGAGGAAGTGGAAGAACATTCTAGACCCAACAGCATCACCGAGGAAGAGTGTGAGAGTCATAACAATGACTCAACCTTAATAAAGTCTCCATTTTTACGTTTGATTTTGTTGGACAATGACATGTTCAAGGAGGAACACCAAGAACTTCTCTCTCTACTCTCAAAACAGAGACACACCCTTTTTTGTTCTGATACCAATGTGACTCCTCCTCGCTACGATGCTGTAATGTGGATTTCTAAGGTTTCAGTGATCTATGGTTTCACTGCTTTGACCACTGTTCTTGCTGTTAACTACTTTGATAGGTTTATCAGCAGCCTAAGTTTTCAAATGAATAAGCCATGGATCACTCACCTCACTGCTGTTGCTTGTTTATCTCTTGCTTCCAAAATGGAAGAGACCCATGTTCCACTTCTTTTAGACCTCCAAGTGGGGGAATCAAGGTTTGTGTTTGAAGCAAAGTCGATACAGAGAATGGAACTTCTAGTGTTGTCCACTCTAAAATGGAAGATGAATCCTGTGACCCCAATTTCATTCTTTGAACACTTTGTGAGAAGGTTTGGTCTAAAGAGTCCCTTGCATTGGGAGTTTCTTCAGAGATCTGAAAGAGTTCTTCTGTCTGTCATTGCCGATTCTAGGGTTATGAGTTTTCTTCCTTCAACATTGGCTGCTGCTACAATGATCCATGTTATTAAAGAGATCGATCCATTTAATGCAATGGAGTGCAGAACTCAACTTCTGGCTTTACTCAAAACTACAGAGGAACAAGTGAATGAGTGCTACAAACTCGTACTGAAACTATTATTTTGCAATGAAGGCGTTCATAACCTTGGGCAGAAGCGCAAATGCTTATCAGGACCAAGTAACTCAGGTGGTGATGTCATGGATGCATCCTTCAGTTATGACAGCTCAAATGATTCATGGACTGTGGAATCATCAGTCACAGTTGAGTCAATGTTTAAGAGGAGCAAAGGTCGAATGCCTTCAGTAAATTGTGCTTCTATTAATGTTCTAAATAGTCCTCATTGA 1110 0.4072 MSLRRQQQQQQHSSSLFLCEEQPHTLDLEEVEEHSRPNSITEEECESHNNDSTLIKSPFLRLILLDNDMFKEEHQELLSLLSKQRHTLFCSDTNVTPPRYDAVMWISKVSVIYGFTALTTVLAVNYFDRFISSLSFQMNKPWITHLTAVACLSLASKMEETHVPLLLDLQVGESRFVFEAKSIQRMELLVLSTLKWKMNPVTPISFFEHFVRRFGLKSPLHWEFLQRSERVLLSVIADSRVMSFLPSTLAAATMIHVIKEIDPFNAMECRTQLLALLKTTEEQVNECYKLVLKLLFCNEGVHNLGQKRKCLSGPSNSGGDVMDASFSYDSSNDSWTVESSVTVESMFKRSKGRMPSVNCASINVLNSPH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0180 369 PANTHER CYCLIN-D3-2 7 354 - -
Lal15g0180 369 MobiDBLite consensus disorder prediction 29 49 - -
Lal15g0180 369 Pfam Cyclin, N-terminal domain 84 199 IPR006671 -
Lal15g0180 369 Pfam Cyclin, C-terminal domain 201 302 IPR004367 -
Lal15g0180 369 SUPERFAMILY Cyclin-like 183 296 IPR036915 -
Lal15g0180 369 CDD CYCLIN 99 191 IPR013763 -
Lal15g0180 369 SUPERFAMILY Cyclin-like 79 199 IPR036915 -
Lal15g0180 369 Gene3D - 200 289 - -
Lal15g0180 369 SMART cyclin_7 104 192 IPR013763 -
Lal15g0180 369 SMART cyclin_7 209 293 IPR013763 -
Lal15g0180 369 Gene3D - 90 199 - -
Lal15g0180 369 PANTHER CYCLINS 7 354 IPR039361 -
Lal15g0180 369 SMART Cyclin_C_2 201 330 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0180 Lal-Chr15 1255978 1258523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0180 1 294 Core Cell Cycle Gene Families AT4G34160 46.179 6.82e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0180 K14505 - gmx:100785030 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0132 4 824655 826647 Lal15g0180 15 1255978 1258523 ECH
Lal21g0217 21 1428124 1430020 Lal15g0180 15 1255978 1258523 ECH
Lal15g0180 15 1255978 1258523 Lal15g0180 15 1255978 1258523 ECH