Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0176 ATGGCCGTGGAACTCATGATGGGTTACATAAATCATAACTTAGCAGCCAAAAGCGAAGAGAACGCTGTTGAAGAAGCAGCCTCAGGGTTAGAGAGTGTGGAGAAACTCATCAGATTACTATCACAAACAAATACTCAACAACAACAATTTCATTCCTCTTCTTCCATGCAAATTGAGATGGACTCAGTAGCTGACGTGGCTGTTTCAAAGTTCAAAAAAGTGATTTCTCTTCTTGGTCAAAACAGAACCGGTCATGCTCGTTTCAGAAGAGCACCTTTGTCCCCTCACAACCCTGAACAAAAACAACAACCTTTGGAACACCATAGGGTTTATCATGCTACGCCATTGCAGCAGATTCCACCAACCATTCAAACTATAGTACCAAAAAATGGAGCTATTATTGAGAGGAAGGACTCATCTAACACCATAAATTTCTCGTATTCATCTGCTGCAAACTCATTCATGTCGTCCCTCACCGGTGACACTGATACAAAACATCCATGTTCTTCATCGCCGGCGACTGCTTTTCAGATCACGAATCCATATGCGGGAAAACCTCCCATTTCTTCATCTTCATTCAAGAGAAAGTGTAGCTCTGAGAACATGGGTTCTGGAAAGTGTGGTAGTTCCTCTAGCCGTTGTCATTGTTCAAAGAAGAGCCGAAAAATGAGGTTGAAGAGAGTGATGAGGATACCAGCAATAAGCTTAAAGATGTCTGATATTCCACCTGATGATTATTCTTGGAGGAAATATGGACAAAAACCCATTAAAGGATCCCCTCACCCACGGGGTTATTACAAGTGCAGCAGTGTTAGAGGGTGCCCCGCAAGAAAACATGTAGAGAGAGCTTTGGATGATCCATCTATGCTTGTTGTCACATATGAAGGCGAGCATAATCATTCACTCTCTGCACCTGAAGCTACTAATCTCATCTTAGAATCCTCTTAA 948 0.4241 MAVELMMGYINHNLAAKSEENAVEEAASGLESVEKLIRLLSQTNTQQQQFHSSSSMQIEMDSVADVAVSKFKKVISLLGQNRTGHARFRRAPLSPHNPEQKQQPLEHHRVYHATPLQQIPPTIQTIVPKNGAIIERKDSSNTINFSYSSAANSFMSSLTGDTDTKHPCSSSPATAFQITNPYAGKPPISSSSFKRKCSSENMGSGKCGSSSSRCHCSKKSRKMRLKRVMRIPAISLKMSDIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSAPEATNLILESS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0176 315 ProSiteProfiles WRKY domain profile. 237 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal15g0176 315 Pfam WRKY DNA -binding domain 244 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal15g0176 315 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 16 315 - -
Lal15g0176 315 SMART WRKY_cls 242 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal15g0176 315 Pfam Plant zinc cluster domain 194 240 IPR018872 -
Lal15g0176 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 315 IPR044810 GO:0003700
Lal15g0176 315 Gene3D WRKY domain 231 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal15g0176 315 SUPERFAMILY WRKY DNA-binding domain 240 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal15g0176 315 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0176 Lal-Chr15 1228169 1229829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0176 1 315 WRKY Transcription Factor Family AT2G24570 39.886 9.09e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal15g0176 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0176 - - qsu:112030051 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0176 15 1228169 1229829 Lal15g0176 15 1228169 1229829 ECH
Lal15g0176 15 1228169 1229829 Lal7g1089 7 16872578 16873626 PCT