Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal15g0173 | ATGAACGGTGAAGGTGGTGGAAGAGGAGAGAGAGAAATGGGTACTACGAGGAAAAAAGTGTTAGAGAGTGGAGAGAGAAGGTACAAAGGAATAAGGATGAGGAAGTGGGGAAAATGGGTTGCTGAGATTAGAGAACCTAACAAGCGTTCAAGGATTTGGCTAGGTTCTTATTCCACACCCGTCGCAGCGGCGCGTGCTTATGACACCGCACTCTTCTATCTTCGCGGCCCTTCAGCTCGCCTCAACTTCCCTGAGCTTCTAACTGGCGAAAACGGCGCCGTTCTTACTAACTGTGACATGTCGGCGGCTTTTATTAGAAAGAAAGCGACTGAGGTCGGTGCCAGAGTTGATGCCCTCCAAGCCACCCACCACCACCACGATGTTGCGGCGGCGCCGGGGATTATCGCTGACGGCGACGACAACCGTTCTAGTCAACTGGCGAAGCTGGTTGACCTGAATAAAATACCAGAACCCGAGAATTCGGATATGAATTAG | 495 | 0.5131 | MNGEGGGRGEREMGTTRKKVLESGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTALFYLRGPSARLNFPELLTGENGAVLTNCDMSAAFIRKKATEVGARVDALQATHHHHDVAAAPGIIADGDDNRSSQLAKLVDLNKIPEPENSDMN | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal15g0173 | 164 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED | 15 | 162 | - | - | |
Lal15g0173 | 164 | Pfam | AP2 domain | 27 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Lal15g0173 | 164 | SUPERFAMILY | DNA-binding domain | 27 | 85 | IPR016177 | GO:0003677 | |
Lal15g0173 | 164 | PRINTS | Ethylene responsive element binding protein signature | 28 | 39 | IPR001471 | GO:0003700|GO:0006355 | |
Lal15g0173 | 164 | PRINTS | Ethylene responsive element binding protein signature | 66 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Lal15g0173 | 164 | ProSiteProfiles | AP2/ERF domain profile. | 27 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Lal15g0173 | 164 | Gene3D | AP2/ERF domain | 26 | 85 | IPR036955 | GO:0003700|GO:0006355 | |
Lal15g0173 | 164 | SMART | rav1_2 | 27 | 90 | IPR001471 | GO:0003700|GO:0006355 | |
Lal15g0173 | 164 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 | 15 | 162 | - | - | |
Lal15g0173 | 164 | CDD | AP2 | 27 | 86 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal15g0173 | Lal-Chr15 | 1218914 | 1219408 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal15g0173 | 16 | 162 | AP2-EREBP Transcription Factor Family | AT2G23340 | 63.816 | 6.60e-55 | 169 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lal15g0173 | AP2 | 4.2e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal15g0173 | K09286 | - | gmx:100783682 | 214.542 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal15g0173 | 15 | 1218914 | 1219408 | Lal15g0173 | 15 | 1218914 | 1219408 | ECH | |
Lal16g0228 | 16 | 1370204 | 1370722 | Lal15g0173 | 15 | 1218914 | 1219408 | LSH | |
Lal15g0173 | 15 | 1218914 | 1219408 | Lal23g1321 | 23 | 14088659 | 14089162 | LSH |