Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0173 ATGAACGGTGAAGGTGGTGGAAGAGGAGAGAGAGAAATGGGTACTACGAGGAAAAAAGTGTTAGAGAGTGGAGAGAGAAGGTACAAAGGAATAAGGATGAGGAAGTGGGGAAAATGGGTTGCTGAGATTAGAGAACCTAACAAGCGTTCAAGGATTTGGCTAGGTTCTTATTCCACACCCGTCGCAGCGGCGCGTGCTTATGACACCGCACTCTTCTATCTTCGCGGCCCTTCAGCTCGCCTCAACTTCCCTGAGCTTCTAACTGGCGAAAACGGCGCCGTTCTTACTAACTGTGACATGTCGGCGGCTTTTATTAGAAAGAAAGCGACTGAGGTCGGTGCCAGAGTTGATGCCCTCCAAGCCACCCACCACCACCACGATGTTGCGGCGGCGCCGGGGATTATCGCTGACGGCGACGACAACCGTTCTAGTCAACTGGCGAAGCTGGTTGACCTGAATAAAATACCAGAACCCGAGAATTCGGATATGAATTAG 495 0.5131 MNGEGGGRGEREMGTTRKKVLESGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTALFYLRGPSARLNFPELLTGENGAVLTNCDMSAAFIRKKATEVGARVDALQATHHHHDVAAAPGIIADGDDNRSSQLAKLVDLNKIPEPENSDMN 164
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0173 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 162 - -
Lal15g0173 164 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Lal15g0173 164 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Lal15g0173 164 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Lal15g0173 164 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Lal15g0173 164 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Lal15g0173 164 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Lal15g0173 164 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Lal15g0173 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 15 162 - -
Lal15g0173 164 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal15g0173 Lal-Chr15 1218914 1219408 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0173 16 162 AP2-EREBP Transcription Factor Family AT2G23340 63.816 6.60e-55 169
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal15g0173 AP2 4.2e-12 CL0081
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0173 K09286 - gmx:100783682 214.542
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0173 15 1218914 1219408 Lal15g0173 15 1218914 1219408 ECH
Lal16g0228 16 1370204 1370722 Lal15g0173 15 1218914 1219408 LSH
Lal15g0173 15 1218914 1219408 Lal23g1321 23 14088659 14089162 LSH