Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0172 ATGGCGTCGTTTCTTCCTTCCAGATCAGAACCTCCCGTCGATCTATCTACAAGAACCGCTGTTAAAGACGTGTTACTGGTTATTGATTCTTTAAAGAAACATGTTGCTGATGAACGGGTTGTTTCCGTAAAGAAAAGAATGGAAGAAAATAGACAGAAGCTGGTTGGTGTCACAAACAGTCTCTACAATATATCTATGGACAGAAAGACCTGCAACATTACTGATTCACACAGTAGTCTGGACCTAATGGGAAAAAGACAAAAAGAAGCAATGGATATGCACAATGGTGTTCATGAAAGTAATGGTGATGTGGAGAGCAATGAATATCATGAAGATAGCCATGGTTCTACAGCAGTTCTTCTGGGATCTAATGTTGCTGTCAAGAATGCTGTTCGCCCTATCAAGTTACCTGAACTTAAAAGATTACCTCCTTATACCTCATGGATTTTCCTGGACAGGAATCAAAGAATGACAGAGGATCAGTCGGTGGTGGGTCGGAGACGAATCTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGTGAGGAGGAAATAATGGAGGATGAAAAGGAAAAAAGAGAATTTTTAGAATCTGAAGATTATATACTTCGCATGACTGTCAGAGAAATTGGTTTATCTGACATAGTTCTGGAGTCGCTGGCACAATGTTTTTCTAGAACCACTAGCGAAATTAAGGCAAGATATGAAACTTTTAGTAATGAAGATAATGCTGGTGGGGGTTCCAAGAATGCAAAGACCGAAGAGAATTCTAAATGTGGAAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTTTTTTGCCGACGATGTCTCGTTTTTGATTGCAGGTTACATGGATGTTCACAGGATCTTGTCTCTCCTGCTGAGAAGCAATGTATGTGGATCCCCACTGATACCGAAAGTGCACCTTGTGGACCAAACTGTTTTCAATTGGTACTTCAATCAGAAAGATTTGCTAAAGCTCCCTCTTCTGCCCAGGCTGGTTCAGAAGAAAAACCCTCTGGTGGTTCTTCAACTAGGAAGAAGTTTTCTTCTAGAAGGCGGATGAAATGCAGCCAAAGCGAAAGTGCTTCGTCTAATGCAAAGAACATTTCTGAGAGTATTGACTCAGAGAATGGTCCTGGGCGGGATGCTGTTTCAGCTTCCCATTTGGCACCACCAAAAACTAAATCTGTTGGGAGAGGTGGAATTGGTAAGAGGAACAGTAAGCGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAGCGGCAGAAGAAAACCGTGGCTTCTGATTCTGATTTCATCGGTGAAGCTCTTGACCGGTCTTCAGATGACATGGTTACTATTGAGTCACCAGTCATGAGCAGTGAAGACAACTTCAGGAAGGAAGAGTTAGTGGATGAGAACATTTGTAAACAAGAACCCACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTCTGGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCCAGGAATCTCTTGAATGGTGTAAAGACTTGTTGGGAGGTATTCCAACACATTAATTGCGAAGAAGGAAAGATGTCAGGTCCTGGCGGGGATGCTGAAAATTATTTTGTGGAAGGCTATCCCAAGGGTAATAATGAAGTGAGGCGAAGGTCAAGATTTTTGCGTAGAAGAGGAAAAGTTCGTCGATTGAAATACACCTGGAAATCTGCTGCATACCATTCAATCCGGAAAAGGATTACCGACAAGAAGGATCAGCCCTGCCGGCAGTACAATCCTTGTGGTTGCCAAACAGCTTGTGGAAAGCAGTGTCCTTGTCTTCTAAATGGAACATGCTGTGAGAAGTATTGTGGGTGCCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGCCAATGCGGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGAGAATGTGATCCAGATGTTTGTAGGCATTGTTGGGTCAGTTGTGGTGATGGTACTCTTGGGATTCCTAGCCAAAGAGGTGATAACTATGAGTGTAGAAACATGAAACTTCTTCTCAAACAGCAGCAGAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGGTGGGGAGCCTTCTTAAAGAATAGTGTTGCCAAGCATGAGTACCTTGGAGAGTATACTGGAGAGTTAATTTCTCACCGGGAGGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCCTTTCTATTTAATCTGAATGATCAGTTTGTTCTTGACGCTTACCGGAAGGGAGACAAATTGAAGTTTGCGAACCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATCATGGTTGCTGGGGATCATAGGGTAGGCATTTTTGCCAAGGAAAGGATCGGTGCCGGAGAGGAACTGTTTTATGATTATCGATATGAGCCTGATAGAGCACCTGTTTGGGCTCGGAAGCCAGAGGCATCTGGATCAAAAAAAGATGACTGTGCACCATCAAGTGGTCGTGCAAAGAAGCTTGCTTAG 2556 0.4272 MASFLPSRSEPPVDLSTRTAVKDVLLVIDSLKKHVADERVVSVKKRMEENRQKLVGVTNSLYNISMDRKTCNITDSHSSLDLMGKRQKEAMDMHNGVHESNGDVESNEYHEDSHGSTAVLLGSNVAVKNAVRPIKLPELKRLPPYTSWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIMEDEKEKREFLESEDYILRMTVREIGLSDIVLESLAQCFSRTTSEIKARYETFSNEDNAGGGSKNAKTEENSKCGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVSPAEKQCMWIPTDTESAPCGPNCFQLVLQSERFAKAPSSAQAGSEEKPSGGSSTRKKFSSRRRMKCSQSESASSNAKNISESIDSENGPGRDAVSASHLAPPKTKSVGRGGIGKRNSKRVAERVLVCMQKRQKKTVASDSDFIGEALDRSSDDMVTIESPVMSSEDNFRKEELVDENICKQEPTDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGVKTCWEVFQHINCEEGKMSGPGGDAENYFVEGYPKGNNEVRRRSRFLRRRGKVRRLKYTWKSAAYHSIRKRITDKKDQPCRQYNPCGCQTACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCGSRQCPCFAADRECDPDVCRHCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVAKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERIGAGEELFYDYRYEPDRAPVWARKPEASGSKKDDCAPSSGRAKKLA 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0172 851 MobiDBLite consensus disorder prediction 336 356 - -
Lal15g0172 851 SMART set_7 702 823 IPR001214 GO:0005515
Lal15g0172 851 Pfam CXC domain 640 671 IPR041355 -
Lal15g0172 851 Coils Coil 182 202 - -
Lal15g0172 851 CDD SET_EZH 702 818 - -
Lal15g0172 851 Gene3D SET domain 602 819 IPR046341 -
Lal15g0172 851 Pfam SET domain 713 816 IPR001214 GO:0005515
Lal15g0172 851 MobiDBLite consensus disorder prediction 336 415 - -
Lal15g0172 851 ProSiteProfiles SET domain profile. 702 817 IPR001214 GO:0005515
Lal15g0172 851 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 445 849 IPR045318 GO:0006338|GO:0018024
Lal15g0172 851 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 445 IPR045318 GO:0006338|GO:0018024
Lal15g0172 851 MobiDBLite consensus disorder prediction 827 851 - -
Lal15g0172 851 MobiDBLite consensus disorder prediction 827 844 - -
Lal15g0172 851 ProSiteProfiles CXC domain profile. 588 687 IPR026489 -
Lal15g0172 851 SMART CXC_2 636 673 IPR033467 -
Lal15g0172 851 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 445 849 - -
Lal15g0172 851 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 21 445 - -
Lal15g0172 851 SUPERFAMILY SET domain 576 822 IPR046341 -
Lal15g0172 851 MobiDBLite consensus disorder prediction 366 386 - -
Lal15g0172 851 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 27 851 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0172 Lal-Chr15 1208185 1216513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0172 691 820 C2H2 Transcription Factor Family AT2G23740 27.211 3.18e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal15g0172 SET 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0172 - K11430 gmx:100809840 1444.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0172 15 1208185 1216513 Lal15g0172 15 1208185 1216513 ECH
Lal16g0224 16 1339040 1348638 Lal15g0172 15 1208185 1216513 LSH
Lal15g0172 15 1208185 1216513 Lal23g0193 23 1741461 1751258 LSH