Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0153 ATGTCATCATCGAATTCCCCGTGCGCAGCGTGCAAGTTTCTGCGGCGGAAGTGCACGCAAGAATGCGTGTTTGCGCCGTATTTTCCACCGGACAACCCTCAAAGATTCGCGTACGTGCACAAGGTTTTCGGTGCCAGCAACGTGGCGAAGCTACTCAACGAACTCAGCGCGTCGCAACGAGACGACGCCGTTAAGTCCCTCGCTTACGAAGCGGAAGCGCGTCTCCGTGACCCCGTTTATGGGTGTGTGGGTCTCATCTCCGTTCTTCAACGTAGGCTCAGGCAGATCCAAGGTGAACTCAGTAATGCTAAGAAGGAACTCGCTACTTATATTGGACCCCAGGCTCTTCAGGGAATGCCCACAACCGCCGTTTTTCAACACCTCCACGCCGCCGCTGCCAACCCTTTTGCTTCCTCCATGTTTCCTTCCATGCCCGCTACTCACGGTGGCCAAATGGTGATTCGTGACCCTCAGCCTCCACAACAACAGATCTTGGGGGATCCGCAATTGGCTGCAGCTGTAGCTGCAAGAGAGCAACAAGATATGTTTCGGGGTTTTGAGAATCAACAGCAGCAGCAACAACAGCTTATGAGGTTCAATAGTGGTAGGTTCGATTTGGGCACGGTTCCTGATGGTGGGTTTTGCCAGCAGGTTTCTTCATCTGCTCCTGTTTCTGAGAACCTCATCGGTTTATCTCCTTCATTGGCTTTGGGGTCTTTTGAGAATCCTTATCATCATATGCAACAACAACAACAGCAAGGAGAACCTCATGCTCATGCTCATCATATTCCGCTTGAGGCTCAGCTACTTCTCACACCTCAGCAGGAAAAGCAGGCGCAACAACAAACTCAGCAGCCACAATTGCCACACCATTACCAACAACAACACTTGGATAGGGGGAGGCGTGGACCTACCTTGTTGATTCCCTAG 930 0.5183 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELSASQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQRRLRQIQGELSNAKKELATYIGPQALQGMPTTAVFQHLHAAAANPFASSMFPSMPATHGGQMVIRDPQPPQQQILGDPQLAAAVAAREQQDMFRGFENQQQQQQQLMRFNSGRFDLGTVPDGGFCQQVSSSAPVSENLIGLSPSLALGSFENPYHHMQQQQQQGEPHAHAHHIPLEAQLLLTPQQEKQAQQQTQQPQLPHHYQQQHLDRGRRGPTLLIP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0153 309 MobiDBLite consensus disorder prediction 274 309 - -
Lal15g0153 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 279 - -
Lal15g0153 309 MobiDBLite consensus disorder prediction 274 292 - -
Lal15g0153 309 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lal15g0153 309 Coils Coil 86 106 - -
Lal15g0153 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 279 - -
Lal15g0153 309 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0153 Lal-Chr15 1074025 1076606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0153 1 230 AS2 family AT5G66870 53.012 9.47e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal15g0153 LOB 2.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0153 - - gmx:100816778 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0208 16 1258069 1263122 Lal15g0153 15 1074025 1076606 LSH
Lal15g0153 15 1074025 1076606 Lal23g1350 23 14296289 14300457 LSH
Lal16g1407 16 10828205 10828888 Lal15g0153 15 1074025 1076606 PCT