Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0152 ATGGACACGCTCATCGTCCACGACAGTGACAGATACGATTTCGTTCGTGATATCGGTTCCGGCAATTTCGGCGTCGCAAGGCTCATGAGAGATAAACACACCAAAGAACTCGTTGCTGTCAAGTATATCCAACGCGGTGATAAGATTGATGAAAATGTAAAGAGAGAAATCATTAATCACAGCTCTCTTAGACATCCTAACATTGTTAGGTTTAAAGAGGTCATTTTGACACCTACTCATCTGGCCATTGTCATGGAATATGCATCTGGAGGAGAACTATTTGAGCGAATTTCGAATGCAGGGCGTTTTACCGAGGATGAGGCTCGTTACTTCTTTCAACAGCTCATATCTGGGGTCAGCTATTGCCATGCAATGCAAGTATGTCACCGGGACTTAAAGTTGGAAAACACTCTGTTGGATGGAAGCTCAGAACCTCGTTTGAAGATATGTGATTTTGGATACTCTAAGTCTTCGGTGCTTCATTCACAGCCAAAGTCAACTGTAGGAACTCCAGCATATATAGCTCCTGAAGTATTGCTCAAGCAAGAGTATGACGGCAAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTGTATGTGATGCTAGTTGGAACATATCCTTTTGAAGATCCTAGTGAACCAAAGGATTACCGAAAGACAATTCAGAGGGTTCTCAGTGTCCAGTATTCCATCCCAGATTTTGTTCACGTATCTCCCGAGTGTCGCCACCTTATCTCAAGGATCTTCGTTTTTGACCCTGCAGAGAGAATCACCATTCCTGAAATATTGAAAAATGAATGGTTTATAAAGAATCGTTCTGCTGAAATGATGGATGAGAAGATGACAAGTAACGAGTTTGAAGAGCCAGATCAGCCGATGCAGAGCATTGATACAATCATGCAGATAATTTCAGAAGCTACCATACCTGCAGCTGGGACTTATTCTTTAGACCAGTTTATGGCTGATAACATGTATATGGATGATGACATGGATGATTTAGACTCTGATTTTGAGCTTGATGTAGATAGCAGCGGGGAGATAGTGTATGCTGACACGCCATATAGTTAA 1068 0.4223 MDTLIVHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIQRGDKIDENVKREIINHSSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERISNAGRFTEDEARYFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSSEPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGTYPFEDPSEPKDYRKTIQRVLSVQYSIPDFVHVSPECRHLISRIFVFDPAERITIPEILKNEWFIKNRSAEMMDEKMTSNEFEEPDQPMQSIDTIMQIISEATIPAAGTYSLDQFMADNMYMDDDMDDLDSDFELDVDSSGEIVYADTPYS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0152 355 SUPERFAMILY Protein kinase-like (PK-like) 7 304 IPR011009 -
Lal15g0152 355 Pfam Protein kinase domain 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0152 355 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Lal15g0152 355 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lal15g0152 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Lal15g0152 355 SMART serkin_6 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0152 355 PANTHER SERINE/THREONINE KINASE 7 346 - -
Lal15g0152 355 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 7 346 - -
Lal15g0152 355 ProSiteProfiles Protein kinase domain profile. 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0152 355 Gene3D Transferase(Phosphotransferase) domain 1 88 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0152 Lal-Chr15 1063303 1067625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0152 11 271 CBL-interacting serine-threonine protein kinases AT5G25110 44.322 2.18e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lal15g0152 Pkinase 3.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0152 K14498 - gmx:100783967 597.43