Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0130 ATGTACACAGGGAATCACTATTACAATAATAGTGGTCAACCCCAAGGTGGTTATTATGGAGGTCAACCCCATCCTGATCATGTTGTTGGGGTCCAAAGTGGAATGGCTCCTCCTAATAGTGGTTGGGGTGCACCACCTCCACAGGTGAACAGTGCTGAAATGAGTTCCAATTTCTCAGCGGGACAACAACCTCTTCCTCCTCCATCACCAAACCTTGCCCTAGGCCTAAAGGGTACCTTCTCTTATGAAGAACTAGCAGCTGCTACCAACGGATTTAATAATCAGAATTTGATAGGACAAGGTGGCTTCGGTTATGTTCACAAAGGGGTGTTGCCTAATGGAAAAGAAGTTGCAGTTAAGAGCTTGAAAGCAGGTAGTGGACAAGGAGAGCGAGAGTTTCAAGCTGAGATTGACATCATTAGCCGTGTTCATCATCGCCATCTTGTTTCACTTGTTGGATACTGTATTTCCGGTGGACAAAGAATGTTGGTCTATGAATTCATTCCCAATAATACTTTAGAATATCACCTTCATGGAAAGGGTGTTCAAACCATGGATTGGCCTACTAGAATGAGGATTGCAATAGGATCAGCGAAAGGGCTTGCCTATCTTCATGAAGACTGTCATCCTCGCATTATCCATCGTGATATCAAAGCTGCAAATGTCCTCATTGATGATAGTTTCGAAGCAAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTTCTGATAACAATACTCACGTATCCACCCGTGTCATGGGAACTTTCGGGTACCTTGCCCCCGAATATGCATCAAGCGGAAAATTGACTGAGAAATCTGATGTTTTCTCATTTGGTGTCATGCTATTGGAACTCATATCTGGGAAGCGACCAGTGGATCTCACAAACACCATGGAGGATAGCTTAGTGGACTGGGCTCGACCACTATTGACTCGTGGATTGGAGGAGGATCCTGGAAACTTTGTGGAGTTGGTTGATCCATTTTTGGAGGGAAATTACAATGCTCATGAAATGGCCAGGATGGCTGCTTGTGCTGCTGGCAGCATTCGCCACTCTGCCAAGAAGCGTCTAAAAATGAGCCAGATTGTGAGAACATTGGAAGGAGATGTCTCACTAGACGACCTGAGGGAAGGGATTATAAAAACAGGAACAACCAATGTTCACACCTCATCTGGTGAGATTCCTTATGATACAATGCAATACAATCATGATATTCTACAGTTCAGAAAGGCTGTGTTTTCAAGTGAAGTAGGCACCAGTAGTGGCTCAAGCAGCGAAATGAGCCGTATTCAAGAGACCCCTAGGAAGCTGACTTAA 1317 0.4457 MYTGNHYYNNSGQPQGGYYGGQPHPDHVVGVQSGMAPPNSGWGAPPPQVNSAEMSSNFSAGQQPLPPPSPNLALGLKGTFSYEELAAATNGFNNQNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFIPNNTLEYHLHGKGVQTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELISGKRPVDLTNTMEDSLVDWARPLLTRGLEEDPGNFVELVDPFLEGNYNAHEMARMAACAAGSIRHSAKKRLKMSQIVRTLEGDVSLDDLREGIIKTGTTNVHTSSGEIPYDTMQYNHDILQFRKAVFSSEVGTSSGSSSEMSRIQETPRKLT 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0130 438 SMART serkin_6 92 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0130 438 ProSitePatterns Protein kinases ATP-binding region signature. 98 120 IPR017441 GO:0005524
Lal15g0130 438 SUPERFAMILY Protein kinase-like (PK-like) 67 366 IPR011009 -
Lal15g0130 438 MobiDBLite consensus disorder prediction 417 438 - -
Lal15g0130 438 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 428 - -
Lal15g0130 438 Gene3D Phosphorylase Kinase; domain 1 71 167 - -
Lal15g0130 438 MobiDBLite consensus disorder prediction 13 65 - -
Lal15g0130 438 MobiDBLite consensus disorder prediction 45 62 - -
Lal15g0130 438 ProSiteProfiles Protein kinase domain profile. 92 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0130 438 PANTHER RECEPTOR-LIKE KINASE 4 428 - -
Lal15g0130 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lal15g0130 438 Gene3D Transferase(Phosphotransferase) domain 1 168 377 - -
Lal15g0130 438 Pfam Protein tyrosine and serine/threonine kinase 95 295 IPR001245 GO:0004672|GO:0006468
Lal15g0130 438 MobiDBLite consensus disorder prediction 417 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0130 Lal-Chr15 922735 925319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0130 80 433 Trihelix Transcription Factor Family AT1G70460 58.592 3.26e-144 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lal15g0130 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0130 - - lang:109332805 795.808