Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0121 ATGCAAACCCAAACGCTGCCTAAGCATAAGTTTAGCCCCGAATGTTTATTTGTTACTTTGCCGCTCCCTGACGGTTCAGTTCTACAGTTACGTGGTGTAGTTTTGCAAAATTTTACAAAGATGAATGACCTGATGACAAGTTCGTTCCTAAGTTATGTTGAACTGAAGAAACAGGTACAGAAGGACATTGAAAAAGAGTATATTGACATTGAAGCAGGGCCACTCAACCCAACACAAGACCCTAACCTTTCTCAGTTCTTCACAGAAGTTGATGGAATCAAAGTTGACATGGAAAAGATCACTAATCTCTTATTTGATCTCAGGCAATTGAATGAAGAGACAAAGTCCACCCACAGTGCCAAAATCCTACGAGGTCTAAGGGACCGCATGGATTCTGACATGGTTGCCGTGCTGCGCAAGGCAAAGATCATCAAGGCTAAGCTTGAGGCTCTTGACAAATCCAACATTGCCAATCAAAGCATATCAGAATCCTACAAAGAGGGTACCCCCATTTATAGGACCAGGGTGTCTGTCACAAATGGTTTGAGGGTCAAACTTAGGGACATGATGAATGATTTCCATTCCTTGAGGGACAAGATTCTTTCTGAGCACAAGGAAGATTTGAAGAGAAGGTACTATACAGCAACTGGCGAGGTTCCGAGTGAGGAGGCCATGGAGAAGATGATCTCAGGGAGCCTCAAAGTTGAGTTTTTGGCTGGGAGAACTGAGGCTGATATGGGTACTCAAATTAGACATGAGGCTGTGATGGATATCCAGAGGAGTTTGAATAAGCTTCACCAAGTGTTTCTTGATATGGCTATTCTTATTGAGACCCAAGGAGAGAAGGTGGATAACATTGAGGATAATGTGGCTAATGCCGGTAACTTCATCCATGGTGGAACCAATAGTCTTTACTATGCGAATCAGATGAAGAAGAGGAGCAAAAAATGGGTCTTTTGGGTTTGTGCTGTTGTGCTCATTATACTGATAGTGTGCATCATTGCAATGTTGTCTTCTTGA 1020 0.4275 MQTQTLPKHKFSPECLFVTLPLPDGSVLQLRGVVLQNFTKMNDLMTSSFLSYVELKKQVQKDIEKEYIDIEAGPLNPTQDPNLSQFFTEVDGIKVDMEKITNLLFDLRQLNEETKSTHSAKILRGLRDRMDSDMVAVLRKAKIIKAKLEALDKSNIANQSISESYKEGTPIYRTRVSVTNGLRVKLRDMMNDFHSLRDKILSEHKEDLKRRYYTATGEVPSEEAMEKMISGSLKVEFLAGRTEADMGTQIRHEAVMDIQRSLNKLHQVFLDMAILIETQGEKVDNIEDNVANAGNFIHGGTNSLYYANQMKKRSKKWVFWVCAVVLIILIVCIIAMLSS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0121 339 Gene3D - 241 338 - -
Lal15g0121 339 SMART tSNARE_6 240 307 IPR000727 -
Lal15g0121 339 Pfam Syntaxin 85 280 IPR006011 GO:0016020
Lal15g0121 339 Gene3D - 78 209 - -
Lal15g0121 339 PANTHER SYNTAXIN-112 44 335 - -
Lal15g0121 339 SMART SynN_4 78 205 IPR006011 GO:0016020
Lal15g0121 339 CDD SNARE_syntaxin1-like 251 304 - -
Lal15g0121 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 245 307 IPR000727 -
Lal15g0121 339 PANTHER SYNTAXIN 44 335 IPR045242 -
Lal15g0121 339 CDD SynN 83 233 IPR006011 GO:0016020
Lal15g0121 339 SUPERFAMILY t-snare proteins 80 300 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0121 Lal-Chr15 854836 856490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0121 41 339 SNARE and Associated Proteins AT2G18260 58.117 1.39e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0121 K08486 - gmx:112997615 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0121 15 854836 856490 Lal23g1425 23 14736852 14738642 LSH