Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0111 ATGGATTCCCTTCTAAGAACACAAACAATAGCAAACGTTGAATTAGAACCACTCCACATGGCTGTGTTGCTGCTCATTCTCTCACTCATCTTCCTCTTATGTTGTGTCTCCCGAATTCGTGTAAGGCCTCCATATCCACCAGGGCCAAAAGGGTTACCCATCATAGGTAACATGCTTATGATGGACCAGTTAACACACCGTGGTTTGGCCAACATAGCTAAGAAATATGGTGGCATCTTCCACCTACGCATGGGGTTCCTTCACATGGTAGCCATTTCAGATGCAGAAGCAGCACGTCAAGTTCTCCAAGTCCAAGATAACATCTTCTCCAACCGACCAGCGACCATAGCCATAAGCTACCTAACCTATGACCGTGCTGACATGGCTTTTGCTCACTATGGACCCTTTTGGCGTCAGATGCGAAAGCTCTGCGTCATGAAGCTCTTCAGCCGAAAGCGTGCTGAGTCATGGCAATCAGTGAGGGACGAAGTTGATATAGTTGTTAGAACCGTTGTAGCAAATACCGGCAAGCCTGTGAATATAGGTGAGCTAGTGTTCAACCTTACAAAAAATATAATCTATCGTGCGGCGTTTGGGTCGAGCTCGCAAGAAGGGCAAGATAAGTTCATAGGGATACTTCAAGAGTTCTCCAAGTTGTTTGGAGCATTTAACATGGCAGATTTCATACCCTATATTGGAGGAATCGACCCTCAAGGCCTTAACACAAGGCTAGTGAAGGCACGTGGGGAATTGGATAGCTTCATAGACAAGATTGTAGATGAACATTTAGTGAAGAAGAGGAATAGAAGTCATGTTGTTGTTGATGAAGAAACTGACATGGTGGATGAGTTGTTAGCTTTTTACAGTGAAGAAGTTGAAGTAAATGAATCGGATGATCTTCACAACACTATCAAGCTCACTAAGGATAACATCAAAGCCATCATCATGGATGTCATGTTCGGAGGAACAGAGACGGTGGCGTCAGCAATCGAATGGACCATGGCAGAGTTGATAAGAAGCCCAGAAGATTTGAAGAAAGCCCAACAAGAGCTCAGTGATGTGGTGGGCCTAGCCCGACGGGTAGAAGAGCCTGACTTCGAGAAACTCAGTTACTTCAAATGTATTATCAAAGAAACCTTACGTCTCCATCCACCCATCCCCCTCCTCCTCCATGAAACGGCGGAGGATGCCACCGTTAACGGTTACTTGGTCCCCAAAAAATCACGCGTCATGATCAACGCGTGGGCTATTGGGAGGGACAAGAATTATTGGGAGGAACCCGAAGCTTTTAAACCAACCCGGTTCTTGAAACAGGGAGTGGCAGATTTTAAAGGGAGCAACTTTGAGTTCATTCCATTCGGGTCGGGTCGTAGGTCATGCCCGGGAATGCAGTTAGGGCTCTACGCGCTTGAGTTGGCGGTGGCTCACCTCCTTCATTGCTTCACATGGGAGTTACCAAATGGAATGAAACCGAGTGAGATGGACATGAGTGACGTGTTCGGACTCACTGCTCCACTCGCGAGTCGACTCGTTGCTGTACCAACTAAGCGTGTGGTGTGCTCTCTTGATTAG 1572 0.4688 MDSLLRTQTIANVELEPLHMAVLLLILSLIFLLCCVSRIRVRPPYPPGPKGLPIIGNMLMMDQLTHRGLANIAKKYGGIFHLRMGFLHMVAISDAEAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDIVVRTVVANTGKPVNIGELVFNLTKNIIYRAAFGSSSQEGQDKFIGILQEFSKLFGAFNMADFIPYIGGIDPQGLNTRLVKARGELDSFIDKIVDEHLVKKRNRSHVVVDEETDMVDELLAFYSEEVEVNESDDLHNTIKLTKDNIKAIIMDVMFGGTETVASAIEWTMAELIRSPEDLKKAQQELSDVVGLARRVEEPDFEKLSYFKCIIKETLRLHPPIPLLLHETAEDATVNGYLVPKKSRVMINAWAIGRDKNYWEEPEAFKPTRFLKQGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPNGMKPSEMDMSDVFGLTAPLASRLVAVPTKRVVCSLD 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0111 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 Gene3D Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 Pfam Cytochrome P450 46 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 SUPERFAMILY Cytochrome P450 46 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PANTHER CYTOCHROME P450 84A1-RELATED 14 523 - -
Lal15g0111 523 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal15g0111 523 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 14 523 - -
Lal15g0111 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0111 Lal-Chr15 783132 786296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0111 53 522 Monolignol Biosynthesis Gene Families AT4G36220 75.687 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0111 K09755 - gmx:100783430 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0111 15 783132 786296 Lal23g1450 23 14878288 14881353 LSH