Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0106 ATGATGGAGTCATGTGTCCCACCGGGATTTCGTTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTATCTCAGGAAGAAAGTTGCATCTCAGAAGATTGACCTTGACGTTATTAGAGAGATTGATCTATATCGAATTGAACCATGGGATCTCATAGAGAGATGCAGGATTGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCAACAGGGACAAGAACCAACAGAGCTACCATGGCGGGGTTCTGGAAAGCGACAGGGAGAGACAAGTTAGTGTATGATAAGACAAAACTGATAGGGATGAGGAAGACACTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACGGATTGGATCATGCACGAATATAGGCTTCAATCTGATGAGAATGGATCTCCACAGTCTCACTCTCAAAACCAAATGGCCTATACCTCAAAGCGTCAAAGTCTAAAACTATATTTCTCAAAGCCATTCCCCACGGAGGAAGGATGGGTTGTATGCAGAGCATTCAAGAAAAGAGCCACCAATGGCCAAAGTAAAAAAATTGAAGGATGGTATTCAAGCTATATCTCTGACGAAGCCAGTGGAGTCAGCTCTGCGTTGGATCCAAATGGTTTCATGTCAATGCATCCTCACAGCGTCGTAGCTCAAAATTTATTGTGCAAACAAGAAACAGAAGCGGCAGAAAACATGAACTGCATGCACCCTCATCATGCAGACCAATTTGTAGAGCTTCCACAACTAGAAAGCCCTTCTTTTTCATTTGCAAAGAGGCCAAACACACTGTCGCACGAAGAATGTGATGATCAAAACAAGACAAAGAAAGTAACTGCTGATTGGAGGGATCTTGATAAATTTGTGGCTTCTCAACTGAGCCAAGAAGATCACAGGAATGAAACGGATAATCGAGACCTGTTAAGCTTTGAAAATCATATAAGCTCTGACATGGCATTGTTCCTTCTTCAGAATAGTAGGGCTGATGAAGAAAACAAGTTAAACCCGTTTTTAAATATAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAATGA 1083 0.4155 MMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLIERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKLVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLQSDENGSPQSHSQNQMAYTSKRQSLKLYFSKPFPTEEGWVVCRAFKKRATNGQSKKIEGWYSSYISDEASGVSSALDPNGFMSMHPHSVVAQNLLCKQETEAAENMNCMHPHHADQFVELPQLESPSFSFAKRPNTLSHEECDDQNKTKKVTADWRDLDKFVASQLSQEDHRNETDNRDLLSFENHISSDMALFLLQNSRADEENKLNPFLNISSDCDIGICVFEK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0106 360 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Lal15g0106 360 ProSiteProfiles NAC domain profile. 6 181 IPR003441 GO:0003677|GO:0006355
Lal15g0106 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 339 - -
Lal15g0106 360 Gene3D NAC domain 15 185 IPR036093 GO:0003677|GO:0006355
Lal15g0106 360 SUPERFAMILY NAC domain 3 181 IPR036093 GO:0003677|GO:0006355
Lal15g0106 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0106 Lal-Chr15 732880 737837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0106 2 359 NAC Transcription Factor Family AT2G18060 57.252 5.64e-145 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal15g0106 NAM 5.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0106 - - aprc:113869508 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0106 15 732880 737837 Lal23g1457 23 14939948 14945146 LSH
Lal15g0106 15 732880 737837 Lal23g0112 23 1108739 1109149 PCT
Lal23g0112 23 1108739 1109149 Lal15g0106 15 732880 737837 PCT