Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0098 ATGGGTATATGTTTTTCCACCACAAAGGTGAGTGGCTCAAACAGCAACAACAACACCACCGCCGCCGCCGGAGCAGTAACCACCGCCATCGTAAACCCGAATCGTAAATGGATTTCAAACACGCAATCCGATGTGACCACCACGGTGGTGAGCATTCAGAAGCAGCAGCAACCGTTGACCGGTGGTCAACGGCAGAAGGTGAAGGAAGAGAGCCATAGTCAAATTCATAGAACGAAAGACAAAGCTTCTTCGAGGCGCCAAGGTGGGCATGTTCCGTGTGGAAAGCGCACAAATTTTGGTTATGACAAAGACTTTGATCGAAGATTCTCGCTTGGGAAATTATTGGGGCATGGACAATTCGGTTACACCTATGTTGGAATTGATAAAAAAAATGGAGATCGTGTTGCCGTTAAGAGACTCGAGAAGAACAAGATGGTTCTCCCTATAGCTGTTGAGGATGTTAAACGAGAGGTCAAGATATTGAAAGAACTTACAGGCCATGAAAATGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTGTGCGAGGGCGGAGAACTGCTAGATCGTATATTGTCCAAGAAAGACAGCCGGTATACTGAAAAAGATGCAGCAGTTGTTGTTAGGCAGATGCTTAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACATAGGGACATGAAACCAGAGAATTTTCTTTTCAGATCATCCAAAGATGATTCATCTTTAAAGGCTACCGATTTTGGTTTGTCTGACTTCATTAAACCTGGAAAGAGGTTTACAGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAACGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATAGGTGTGATCACATACATATTGCTCTGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAAGAGGTGATAAGGAACAAGCCTGATTTCCGCCGAAAGCCATGGCCAACCATAAGTAGTGCTGCTAAAGATTTTGTGAAAAAATTGTTGGTAAAGGATCCTCGTGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAAAGAAGGAGGGGAGGCATTGGAGATTCCTATTGATATATCTGTCCTGAGCAACATGCGACAGTTTGTGAAGTATAGTCGACTGAAACAGTTTGCATTGAGGGCATTGGCTAGTACAATTAATGAAGAAGAGTTGTCTGATCTAAAGGATCAATTTGATGCAATAGATGTGGACAAAAACGGTGTTATCAGCCTTGAAGAGATGAGACAGGCTCTTGCTCAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTACTAGAGATACTGCAAGCGATAGATAGCAACACAGATGGGCTAGTGGATTTCTCTGAGTTTGTTGCAGCTGCATTGCATGTGCATCAATTGGAGGAACATGATTCAGAGAAGTGGCAGGAACGGTCACAGGCTGCTTTCGAGAAATTTGACTTGGATAAGGATGGCTATATTACTGCAGATGAACTTAGAGTGCATACATGCCTGAAAGGCTCCATTGATCCATTGCTTGAGGAAGCCGATATCGACAAAGATGGAAAGATCAGCTTACCCGAATTTCGGAGACTTCTAAGAACTGCAAGCATAGGTTCTCGAAACATGATGAGCCCACACAGCTATAGATGA 1704 0.4349 MGICFSTTKVSGSNSNNNTTAAAGAVTTAIVNPNRKWISNTQSDVTTTVVSIQKQQQPLTGGQRQKVKEESHSQIHRTKDKASSRRQGGHVPCGKRTNFGYDKDFDRRFSLGKLLGHGQFGYTYVGIDKKNGDRVAVKRLEKNKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFRSSKDDSSLKATDFGLSDFIKPGKRFTDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVIRNKPDFRRKPWPTISSAAKDFVKKLLVKDPRARLTAAQALSHPWVKEGGEALEIPIDISVLSNMRQFVKYSRLKQFALRALASTINEEELSDLKDQFDAIDVDKNGVISLEEMRQALAQDLPWKLKESRVLEILQAIDSNTDGLVDFSEFVAAALHVHQLEEHDSEKWQERSQAAFEKFDLDKDGYITADELRVHTCLKGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNMMSPHSYR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0098 567 CDD EFh 416 477 IPR002048 GO:0005509
Lal15g0098 567 SMART serkin_6 109 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0098 567 ProSiteProfiles EF-hand calcium-binding domain profile. 412 447 IPR002048 GO:0005509
Lal15g0098 567 SMART efh_1 416 444 IPR002048 GO:0005509
Lal15g0098 567 SMART efh_1 495 523 IPR002048 GO:0005509
Lal15g0098 567 SMART efh_1 525 553 IPR002048 GO:0005509
Lal15g0098 567 SMART efh_1 453 481 IPR002048 GO:0005509
Lal15g0098 567 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 559 - -
Lal15g0098 567 Pfam EF-hand domain pair 497 550 IPR002048 GO:0005509
Lal15g0098 567 Pfam EF-hand domain pair 415 477 IPR002048 GO:0005509
Lal15g0098 567 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 38 559 - -
Lal15g0098 567 ProSitePatterns EF-hand calcium-binding domain. 534 546 IPR018247 -
Lal15g0098 567 MobiDBLite consensus disorder prediction 65 86 - -
Lal15g0098 567 SUPERFAMILY Protein kinase-like (PK-like) 99 399 IPR011009 -
Lal15g0098 567 Gene3D Phosphorylase Kinase; domain 1 102 194 - -
Lal15g0098 567 ProSiteProfiles EF-hand calcium-binding domain profile. 529 556 IPR002048 GO:0005509
Lal15g0098 567 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Lal15g0098 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Lal15g0098 567 Gene3D - 390 549 - -
Lal15g0098 567 CDD EFh 497 551 IPR002048 GO:0005509
Lal15g0098 567 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Lal15g0098 567 ProSiteProfiles Protein kinase domain profile. 109 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0098 567 SUPERFAMILY EF-hand 401 552 IPR011992 -
Lal15g0098 567 ProSitePatterns EF-hand calcium-binding domain. 425 437 IPR018247 -
Lal15g0098 567 Pfam Protein kinase domain 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0098 567 MobiDBLite consensus disorder prediction 54 95 - -
Lal15g0098 567 Gene3D Transferase(Phosphotransferase) domain 1 195 389 - -
Lal15g0098 567 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Lal15g0098 567 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Lal15g0098 567 CDD STKc_CAMK 108 368 - -
Lal15g0098 567 Gene3D - 410 479 - -
Lal15g0098 567 ProSiteProfiles EF-hand calcium-binding domain profile. 491 526 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0098 Lal-Chr15 660842 666118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0098 1 566 EF-hand Containing Proteins AT2G17890 74.126 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal15g0098 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0098 K13412 - gmx:100817249 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0140 16 831878 837715 Lal15g0098 15 660842 666118 LSH