Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0067 ATGGGAGGTTGCTGTTGTTGTTCATCGAAGGAGATTCAATTGAACGCTCAACCTCGTTCTCCATACTACTACTACCCAAGATTATCAGAGGAGCATATCCCACTATCATCTCACCACAATGCTGCCTCTGGTTTTTCTGGAGGGCTCTTAGTTGATACTAATCTAGACACTTCAAGTCCTGATACTTATAGACCGCCTCCTGCTCCTATCCCTTTCAATGTTATTTTAGGTGTCACTCAAACACCACCTGTTGCTCAAGAAATTTGTGTTGACAAGACTGATGCGTCCCTGCATCCTGAAAATTCTGATCCAAATCAAGAAACAGTTACTGGGGACAATCATGGGGCCTCAGCTAAGGCCGGCGAACTGAAGGAATCGGAGTGCAAAGTTCAAACTGCTTTAGAACTTGACTCAGCAAAGGATTCTGAAGTTGAACTTCCAAAGTTGGCAGAACCTATCAGTTTTGTGGAAGAAGAGGATACATGCCCAATTTGTTTAGAAGAATATGATGCAGAGAATCCAAAACTCCTCACAAAATGTGACCATCATTTTCACCTGGCATGCATTCTTGAATGGATGGAAAGAAGTGAAACTTGTCCGGTGTGTGATCAGGATATGGTTTTAGACCTTCCATTAGATTGA 642 0.4268 MGGCCCCSSKEIQLNAQPRSPYYYYPRLSEEHIPLSSHHNAASGFSGGLLVDTNLDTSSPDTYRPPPAPIPFNVILGVTQTPPVAQEICVDKTDASLHPENSDPNQETVTGDNHGASAKAGELKESECKVQTALELDSAKDSEVELPKLAEPISFVEEEDTCPICLEEYDAENPKLLTKCDHHFHLACILEWMERSETCPVCDQDMVLDLPLD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0067 213 MobiDBLite consensus disorder prediction 99 113 - -
Lal15g0067 213 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 212 - -
Lal15g0067 213 SMART ring_2 162 202 IPR001841 -
Lal15g0067 213 MobiDBLite consensus disorder prediction 95 124 - -
Lal15g0067 213 Pfam Ring finger domain 160 202 IPR001841 -
Lal15g0067 213 SUPERFAMILY RING/U-box 156 209 - -
Lal15g0067 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 208 IPR013083 -
Lal15g0067 213 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 212 - -
Lal15g0067 213 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0067 Lal-Chr15 458714 461961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0067 1 213 C3H Transcription Factor Family AT5G41350 52.995 2.41e-73 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0067 15 458714 461961 Lal15g0067 15 458714 461961 ECH