Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0066 ATGGGATTTCCAGAGCTTCTAATTCCAAAGTTATTCGTTCACATCCTTTCCTTATTAGGTTTCATAAGAAACCTTATCCTCATCTTCTTTCGCTATCTCGGCCTCCATGATTTCCTTGAACCCGACATTGTCTGGCCCCATCCGCCACCACAGTTCCAATCTGTATCAGCCTTACTCTTACGGGAAATTCTACCGGTGGCCAAGTTCTCGGAGCTGGAGGAGCCTTCGGCGGAGAGCTGCGCCGTGTGTCTGTACGAATTTGAAGCGGATGAGGAGATCAGACGGTTGAGAAACTGTCGCCATATATTCCATAAGGATTGCCTAGACCGTTGGATGGAGTATGATCAGAGAGCGTGTCCCTTGTGTAGGACACCCTTCATACCTCATCATATGCAACGTGCTTTCAATGAGACCTTGTGGCTTGCTTCTGGGATCCCTCAATTTTACTCTGAATATCCTCACATCTCTGATTTCTACACCTTTGTCGAATACTAA 495 0.4667 MGFPELLIPKLFVHILSLLGFIRNLILIFFRYLGLHDFLEPDIVWPHPPPQFQSVSALLLREILPVAKFSELEEPSAESCAVCLYEFEADEEIRRLRNCRHIFHKDCLDRWMEYDQRACPLCRTPFIPHHMQRAFNETLWLASGIPQFYSEYPHISDFYTFVEY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0066 164 Pfam Ring finger domain 79 123 IPR001841 -
Lal15g0066 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 128 IPR013083 -
Lal15g0066 164 ProSiteProfiles Zinc finger RING-type profile. 80 123 IPR001841 -
Lal15g0066 164 SUPERFAMILY RING/U-box 64 137 - -
Lal15g0066 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 152 - -
Lal15g0066 164 SMART ring_2 80 122 IPR001841 -
Lal15g0066 164 CDD RING-H2 80 123 - -
Lal15g0066 164 PANTHER BRH1 RING FINGER PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0066 Lal-Chr15 457075 457569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0066 1 144 C3H Transcription Factor Family AT1G63840 56.000 1.78e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0066 K16281 - jre:109014495 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0066 15 457075 457569 Lal15g0066 15 457075 457569 ECH
Lal15g0066 15 457075 457569 Lal23g1532 23 15467206 15467694 LSH
Lal15g0066 15 457075 457569 Lal15g1408 15 16218695 16219126 PCT