Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0065 ATGATCATTTCCGAGAAGAACCGTAAGGAGATCTCCAAATACCTCTTTCAAGAGGGAGTTTGCTATGCTAAGAAGGACTTCAATTTGGCGAAGCACCCAGCGATAGATGTGCCAAATCTGCAGGTGATTAAGTTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTACTGGTTCCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTCTGAGATTGTCCCTGCCACACTTAAGAAGCAGGCCAAGCCAGCTGGAAGACCCTTTGGTGGCCCACCCGGTGATCGCCTTCGGGGCCCACCCCGCTTTGATGGAGAAAGAAGATTTGGTGGTGACCGTGATGGATACCGTGGGGGTACCCGAGGACCTGCTGGTGACTTTGGAGGAGAGAAGGGTGGAGCTCCTGCTGACTACAGGCCTTCTTTCGGGGGTCCTGGTGGAAGGTCTGGGTTCGGTCGCGGTGCTGGTGGCTATGGAGCACCACCCCCTTCAAATGCTTAA 540 0.5204 MIISEKNRKEISKYLFQEGVCYAKKDFNLAKHPAIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRLRGPPRFDGERRFGGDRDGYRGGTRGPAGDFGGEKGGAPADYRPSFGGPGGRSGFGRGAGGYGAPPPSNA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0065 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Lal15g0065 179 Gene3D - 1 104 IPR036388 -
Lal15g0065 179 MobiDBLite consensus disorder prediction 93 179 - -
Lal15g0065 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 172 IPR037447 -
Lal15g0065 179 MobiDBLite consensus disorder prediction 112 128 - -
Lal15g0065 179 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0065 Lal-Chr15 450136 451881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0065 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.935 7.23e-74 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0065 K02947 - csv:101212088 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0065 15 450136 451881 Lal15g0065 15 450136 451881 ECH
Lal16g0088 16 524423 526725 Lal15g0065 15 450136 451881 LSH
Lal15g0065 15 450136 451881 Lal23g1537 23 15508506 15512886 LSH
Lal15g0065 15 450136 451881 Lal16g1195 16 8232471 8234145 PCT