Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0057 ATGGCAACTTTGATGGAGGAGCCAACTAACTCAAACTCTATGCAAAACCAATCCAACATTACAAATCATCACAATAATATCAAAATGGAGAGTAAGAGTAGCACTAACATCATCACAACCAAACAAATTCATCATAATTATCCAAATAATAATAAGAATAAGAATAAGAGAAAGATACCTTATTCTGAAGCTGTGTGTGATGATGTGATTCCCACACTCGATTCCACAAAAAAAACACTCCTCTCTGAATCACACGGTTCCATATCTGTGATAGGGCGAAGGAGGTTGATGGAGGACGCCGTCAAGGTTGTTCCTCATTTCATGCTCTACGGAGGTTGCTACTATGATTTCTTTGCTGTTTATGACGGTCACGGTGGGACGTTGGTGGCGGACGCATGCCGTGACAGGTTACACTTGCTATTGGCAGAGGAAATTAATATGGAGAACAAGGACTTATTGGACTGGCATAAACTCATGGCTTCGTGTTTCTTCAAGATGGACATGGAAATTAGCAAGGGAGGGAATACCATGGGTTCCACGGCGGCGGTTGTAGTGATCGGGAAGGAGGAGATTGTGGTGGCTAATTGTGGAGACTCAAGAGCAGTGTTATCTCGTGGCGGTGTAGCTGTGCCACTTTCACGTGATCATAAGCCTGATAGAGAAGATGAAAAACATAGGATTGAGGCAGCTGGTGGAGTAGTGATTGATTGGGATGGGAAACGTGTTTTAGGTGTACTTGCCACTTCCAGATCCATAGGTGACCACTGCATGAAGCCTTTCGTGATATCAGAACCTGAGATAAATGTGTATCAAAGAACAGAGTTAGATGAGTTTGTTGTAGTAGCAAGTGATGGCTTATGGGATGTGGTATCTAACAAATGTGCTTGTCAAGTAGTAAGAAGTAACATCAATGCGCATATGAAGAAGAAGAAGAATGATAAAGATGAGTGTATTACAAGTTATGCACCAGAAGCAGCAGCATTGCTAGCTGAGTTGGCTATGGCTCGTGGAAGCCAAGACAACATCAGTGTCATAGTCATTCAACTCAATACTATCATTTTACCCAAATAA 1071 0.4211 MATLMEEPTNSNSMQNQSNITNHHNNIKMESKSSTNIITTKQIHHNYPNNNKNKNKRKIPYSEAVCDDVIPTLDSTKKTLLSESHGSISVIGRRRLMEDAVKVVPHFMLYGGCYYDFFAVYDGHGGTLVADACRDRLHLLLAEEINMENKDLLDWHKLMASCFFKMDMEISKGGNTMGSTAAVVVIGKEEIVVANCGDSRAVLSRGGVAVPLSRDHKPDREDEKHRIEAAGGVVIDWDGKRVLGVLATSRSIGDHCMKPFVISEPEINVYQRTELDEFVVVASDGLWDVVSNKCACQVVRSNINAHMKKKKNDKDECITSYAPEAAALLAELAMARGSQDNISVIVIQLNTIILPK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0057 356 ProSitePatterns PPM-type phosphatase domain signature. 117 125 IPR000222 GO:0043169
Lal15g0057 356 Gene3D - 79 352 IPR036457 -
Lal15g0057 356 MobiDBLite consensus disorder prediction 1 20 - -
Lal15g0057 356 CDD PP2Cc 84 349 IPR001932 -
Lal15g0057 356 ProSiteProfiles PPM-type phosphatase domain profile. 84 349 IPR001932 -
Lal15g0057 356 SMART PP2C_4 74 347 IPR001932 -
Lal15g0057 356 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 28 351 - -
Lal15g0057 356 SUPERFAMILY PP2C-like 78 350 IPR036457 -
Lal15g0057 356 Pfam Protein phosphatase 2C 87 342 IPR001932 -
Lal15g0057 356 PANTHER ALPHABET, ISOFORM E-RELATED 28 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0057 Lal-Chr15 408449 410638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0057 69 349 PP2C-type Phosphatase Gene Family AT1G07430 45.921 1.72e-85 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0057 K14497 - gmx:100785905 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0057 15 408449 410638 Lal15g0057 15 408449 410638 ECH