Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0048 ATGGGGTGCATATGTTCAAAAGAATCATCATCAGAGAAAGATAAAGTTGATGAATATGAGAAAGAGAATGAGTTGAAAAAGTTTTCAGTACAATTGGTTGCTCCTAATGTCTCAACTGCAGAGTTAGATGGTGGTGGTGATAGTATGGAAGATGATGATGGCTCAGTTCCACATATAGCTAAGTCATATTCACAAATAATAAAGAGTTGTGTCCCAGCACTATCACTATTAGAAGATAAAAACAACAACAACAACAACCCCTTAGATGTTGTAAAATCAACAACAAAAGGAAAATATAGGAATCAGACATGTATAACATTAGGTGGTGGTGAAAGAAAGCCAATGATGAGTAGAATACTTAGTGTACCACATGGTCTAGGAGGATATATTGATAATGCATGGCCATCATGGTTATCTTCAGTTGCTGGAGAAGCCATCAAGGGCTGGGTTCCTCGAAGGGCAGACTCTTTTGAAAAACTAGACCAAATTGGACAGGGCGCTTATAGTAGTGTCCATAAAGCTCGTGACCTTGAAACTGGTAAAGTTGTGGCTTTGAAGAAAATCCGATTTTTAAGTTCGGATCCTGAGAGTGTACGTTTCATGGCAAGGGAAATCTATATTTTGCGTCAACTTGACCATCCAAATGTTATAAAGCTTGAAGGTGTTGTCACTTCAACTACTTCCACAAGTTTGTATCTTGTTTTTGAATATATGGAGCATGACCTTGCTGGACTAGCAGCACTACCTGGCATAAAGTTCACTGAACCACAGATTAAATGTTTCCTACAACAACTGCTTTGTGGGCTTGAACACTGCCATCAACGCGGTGTGCTGCACCGTGACATCAAGGGTTCAAATCTTTTGATTGACAACAATGGAAATCTTCAGATTGCAGATTTCGGTCTTGCAACTGTTTATGACCCTGATAAAAAGCAGGCATTAACTAGTCGTGTTGTAACACTATGGTATAGGGCACCTGAGCTTTTGCTAGGTGCTACTGAATATGGTTCTGGAATTGACTTGTGGAGTGTTGGTTGCATTCTATCAGAATTGCTGGTAGGGAAACCTATTATGCCCGGAAGAACTGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCTCCGTCTGAAGACTATTGGCAAAGAACAAAACTTCCTCATGCAACAAGTTTCAAACCACAACACCGTTACAAACGCAATATCTTTGAGACATTTAAAAGTTTTCCTTCTTCAGCATTGGCTCTTGTTGATAAGCTCCTTGCAATAGAACCCGAAAATCGAGGGTCTGCAACTTCTGCACTTAACAGTGAGTTCTTGACTACAAATCCCTTACCTTGTGATCCCTGGAGTTTACCCAAGTTTCCACCAAGCAAGGAGCTTGATGCCAGGCGTCGAGACAAAGAAGAAATGAGGAAAAATAATGAAGCTGTGAAAGGACGTGAACCACTATCTGTTTTAAGAGGAGCGGGAAATACCAAAGTACTGAGATCACCCGAGGGAAATATAACTATACAGGGGAAGTCACATAGTAGAAATTCGATTGTTAAAAATAAATCCCATGAGGATGATGGGTCACAGCATAAGAGGGATCCAATTACAAGAGTATCTGTACAAAATGGTTATACACATTCAACTTCAATGATGCATGGAAGTGGAACAGGACAATCTTCAATGCATAAGTTAGCAGACATGTCTAGGAAGAATCCAGATTTAAGGACACAAAGTGAGAATCACGTAACAGATTTCTCTGCCTCTTCCATTAAAAGGGACCAAGGAGCCTCTGGCCGGGGGTATGTGGCCAAGAAAAATAGGATACACTACTCTGGACCATTGGTGCCTCCAGGTGGCAACATTGATGACATGCTCAAAGAGCATGAGAGATTAATGCAAGAAGCTTTTAGGAGTGTCAAGAAGACCAATCATAAAAACTAA 1938 0.404 MGCICSKESSSEKDKVDEYEKENELKKFSVQLVAPNVSTAELDGGGDSMEDDDGSVPHIAKSYSQIIKSCVPALSLLEDKNNNNNNPLDVVKSTTKGKYRNQTCITLGGGERKPMMSRILSVPHGLGGYIDNAWPSWLSSVAGEAIKGWVPRRADSFEKLDQIGQGAYSSVHKARDLETGKVVALKKIRFLSSDPESVRFMAREIYILRQLDHPNVIKLEGVVTSTTSTSLYLVFEYMEHDLAGLAALPGIKFTEPQIKCFLQQLLCGLEHCHQRGVLHRDIKGSNLLIDNNGNLQIADFGLATVYDPDKKQALTSRVVTLWYRAPELLLGATEYGSGIDLWSVGCILSELLVGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKLPHATSFKPQHRYKRNIFETFKSFPSSALALVDKLLAIEPENRGSATSALNSEFLTTNPLPCDPWSLPKFPPSKELDARRRDKEEMRKNNEAVKGREPLSVLRGAGNTKVLRSPEGNITIQGKSHSRNSIVKNKSHEDDGSQHKRDPITRVSVQNGYTHSTSMMHGSGTGQSSMHKLADMSRKNPDLRTQSENHVTDFSASSIKRDQGASGRGYVAKKNRIHYSGPLVPPGGNIDDMLKEHERLMQEAFRSVKKTNHKN 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0048 645 MobiDBLite consensus disorder prediction 504 585 - -
Lal15g0048 645 Gene3D Transferase(Phosphotransferase) domain 1 245 481 - -
Lal15g0048 645 MobiDBLite consensus disorder prediction 451 483 - -
Lal15g0048 645 MobiDBLite consensus disorder prediction 516 532 - -
Lal15g0048 645 Coils Coil 624 644 - -
Lal15g0048 645 CDD STKc_CDK9_like 157 440 - -
Lal15g0048 645 SMART serkin_6 157 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0048 645 MobiDBLite consensus disorder prediction 533 564 - -
Lal15g0048 645 MobiDBLite consensus disorder prediction 459 480 - -
Lal15g0048 645 Gene3D Phosphorylase Kinase; domain 1 152 244 - -
Lal15g0048 645 ProSiteProfiles Protein kinase domain profile. 157 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0048 645 Pfam Protein kinase domain 157 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0048 645 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 89 639 - -
Lal15g0048 645 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Lal15g0048 645 SUPERFAMILY Protein kinase-like (PK-like) 150 449 IPR011009 -
Lal15g0048 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Lal15g0048 645 PANTHER CELL DIVISION PROTEIN KINASE 89 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0048 Lal-Chr15 354891 358492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0048 149 480 Core Cell Cycle Gene Families AT5G10270 51.724 2.61e-118 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal15g0048 Pkinase 2.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0048 K08819 - gmx:100791743 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0048 15 354891 358492 Lal23g1571 23 15707675 15717702 LSH