Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal15g0041 | ATGGGATTCTGGGGGATTGAAGTGAAACCTGGAAAACCGATTCCTTATCATGCGGACAATGTGCAAGGAAAGCTTCACGTCACCCAGGCTACTCTAGGCACTGGTTCATCAGTGGAGAAAAGCATTCTTCAGTGCTCTTCTGGACACAAAAGTCCAGTTTTCTTATGTTCATTGCTGCCAAATAAGATTGAGTCATGCCCTTTGAATCTCGAGTTTGACGATGACGACTTAGTGGCATTCTCAGTGATTGGTCCACGAAGCATCCATCTTTCTGGTTATTTTGTGGCCGATGACGGGGATGACCTTAGGGATGACTATGAATATGATTCATTTGGTGAGGATGTTGAGGGAACTGAGACTGAGGAGTCTTCTGAATATGATTCTGAAGATGGATATGACTTCATTGATGGTAGTGATGTTGATATGTACCGATCTTCATCTGTCCCAAATAGTGGAGTTGTAATTGAGGAAATAGTGGACGAAGATAAACCTGATGTTGAAGATGATCCAGCTAAGCAATCAAAGAAAAAGAAGCAAGCAGTTCGGTTGAAAGAGAATGACAGCAAAAGCTCTCAGCTTCCAATTGTTGCTGGGGATGGAACTATCCCACTGAATCTGGAAAGTGAACTTGATGTTGAGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTGCAGCACAGAAAAGTAAATTCGAGAGCCCAAAGGAAGAAGCTGAAACGAAAGAAGGACAAGCACATAAGAAAACTGAGAAAGCCAATAAGAAGGGAAAACAGGTTGATCGTTCTGCTGGTTTAAAGCGAAAAGTTGAAAGTGCTGATGATGATGTGCAGCATAAAGATGGGAAAAAGAAGAAGAATAAAAAAGATAAGTTGAAAGAACATGGTGAAGGGGGAAGTGCTCATGTGGCTGGTATTAGTAATGAGGCTATTGTTACTACTCCAGATGAAAAGCATTCCGAGGAGGTTAAAACTACAATCAACGTGAACAATGCTTCTGAGGCAAAGGATGGGCAGCATGATGAAATTCTATCTAATAAGGAGCTCATTGTTGAGAAGAAAAATAAGAAGAAGAAGAAGAAAAAGGCCAAAGAGCCTGAAGAAGGTGCTACTGCAAATGAAATTGCTACCACTGTGGAAAATAAAGATTTATCCACCTTGGAGAAAAAAGGGAAGAAAACTGCCGAAGAAGTGCCATCTCAAGTAAGATCCTTTCCGAATGGGTTGGTTATTGAGGAGCTATCTATGGGTAAACCAGATGGCAAACGAGCTACTGCTGGAAAGAAGGTCAGTGTTAAATACATTGGCAAGCTGAAAAAGGATGGGAAAATATTCGACTCAAACGTGGGAAGAGCACCATTTAAATTTCGCCTTGGTGTAGGACAAGTCATCAAGGGGTGGGAAGTTGGGGTCAACGGGATGAGAATTGGTGATAAAAGAAGAATCACAGTTCCGCCATCTATGGGATATGGAGACAAGCGTGCTGGGACTATACCACCAAATTCGTGGCTTGTATTTGATGTCGAGTTGGTGAATGTTGATGGCTGA | 1545 | 0.4188 | MGFWGIEVKPGKPIPYHADNVQGKLHVTQATLGTGSSVEKSILQCSSGHKSPVFLCSLLPNKIESCPLNLEFDDDDLVAFSVIGPRSIHLSGYFVADDGDDLRDDYEYDSFGEDVEGTETEESSEYDSEDGYDFIDGSDVDMYRSSSVPNSGVVIEEIVDEDKPDVEDDPAKQSKKKKQAVRLKENDSKSSQLPIVAGDGTIPLNLESELDVEESEDEDGFPISAAQKSKFESPKEEAETKEGQAHKKTEKANKKGKQVDRSAGLKRKVESADDDVQHKDGKKKKNKKDKLKEHGEGGSAHVAGISNEAIVTTPDEKHSEEVKTTINVNNASEAKDGQHDEILSNKELIVEKKNKKKKKKKAKEPEEGATANEIATTVENKDLSTLEKKGKKTAEEVPSQVRSFPNGLVIEELSMGKPDGKRATAGKKVSVKYIGKLKKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGVNGMRIGDKRRITVPPSMGYGDKRAGTIPPNSWLVFDVELVNVDG | 514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal15g0041 | 514 | Pfam | Nucleoplasmin-like domain | 3 | 95 | IPR041232 | - | |
| Lal15g0041 | 514 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 275 | 512 | - | - | |
| Lal15g0041 | 514 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 1 | 261 | - | - | |
| Lal15g0041 | 514 | Gene3D | - | 400 | 513 | IPR046357 | GO:0003755 | |
| Lal15g0041 | 514 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 261 | - | - | |
| Lal15g0041 | 514 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 275 | 512 | - | - | |
| Lal15g0041 | 514 | MobiDBLite | consensus disorder prediction | 160 | 378 | - | - | |
| Lal15g0041 | 514 | Gene3D | Nucleoplasmin core domain | 1 | 100 | - | - | |
| Lal15g0041 | 514 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 421 | 510 | IPR001179 | GO:0003755 | |
| Lal15g0041 | 514 | PIRSF | FK506-bp_FPR3 | 198 | 309 | IPR023566 | GO:0003755 | |
| Lal15g0041 | 514 | PIRSF | FK506-bp_FPR3 | 1 | 55 | IPR023566 | GO:0003755 | |
| Lal15g0041 | 514 | PIRSF | FK506-bp_FPR3 | 49 | 201 | IPR023566 | GO:0003755 | |
| Lal15g0041 | 514 | PIRSF | FK506-bp_FPR3 | 303 | 513 | IPR023566 | GO:0003755 | |
| Lal15g0041 | 514 | SUPERFAMILY | FKBP-like | 378 | 512 | - | - | |
| Lal15g0041 | 514 | MobiDBLite | consensus disorder prediction | 165 | 185 | - | - | |
| Lal15g0041 | 514 | MobiDBLite | consensus disorder prediction | 230 | 282 | - | - | |
| Lal15g0041 | 514 | MobiDBLite | consensus disorder prediction | 110 | 131 | - | - | |
| Lal15g0041 | 514 | MobiDBLite | consensus disorder prediction | 334 | 351 | - | - | |
| Lal15g0041 | 514 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 426 | 513 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal15g0041 | Lal-Chr15 | 315418 | 321234 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal15g0041 | 422 | 512 | Calmodulin-binding Proteins | AT5G48570 | 34.694 | 9.23e-09 | 55.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal15g0041 | K14826 | - | gmx:100792856 | 641.728 |