Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0022 ATGAGTACCGCCGGAGATTGGTCAGATGAGGAGCGCTCTGTCATTGGAGGGAAGGCAGAAATCGGATTTTTAGATTTTGAGGAAGAGAAATCTTTTTATAGTTATGCTGATAATGAAGAGGAACCAATCATTATATCTGCACCATTTGCACTTGTCGATGGGAAACCTCAATCAGTATTTGTTGGACATACTGCTGTGGATTTAATAACCATTAAGAATACTACTTCTGAACCCGTGACCCTATGGAGTGTTCACATATTTGCCTCAAATCCGGCAGACTCTTTCACTCTTTCTCTGATGGAACCTCCATCAGCAAATTCAAATTCAGAAATATGTGCAGTTCAGAGCTTTTTAGAATCATTCACTTTGGAGGACAGGATGCTTCAGCCTGGTCAGACCTTAAAAGTATGGTTGTCTTGCAAAACAAAAGATATGGGCATGTACTCTTCAGTTCTGAATTTTGATCTTGGAGATAAAGTTATAGAAAGGGTGGCTTTCCTCTTAGTTGAAGACAAAATATCCAAGTCTTTGACTGCTAAGAGACCTTATTCAAAAGGAAGGAGAAAAGACAAATTTGTTGTGGAAAATGTTGTTCCAGGCTTTCGTCCTCTAGGGAAGGCAAATCGGAAATACATAAATAGGCTTCCAAAATATCAAATTCCGAGCGACGTCAGAGACTTGCTTGAGAGCAAGCAGATCCCTCAAGTTGTTGAAGAAGGTCTTAGAAAAGGCCGTTATGCTGCTTATTTCAAGACATTAATAATAATGGAAGAAATACAATTGGAGGAAGACATGAGGACTTATGACATGGATTCTGTAACAATGAGGAAGAAATCAAATCAATTCTTGTCCATGGAGGTTCCTGGGCTTGCTGAGAGACGTCCGTCACTAGTTCATGGGGATTATATCTTTGCCAAGATAGCATCGGAACATGATAACAACAACAAATCCTATCAGGGATTCATCCACCGCGTCGAAGCTGATGAGATCTATTTGAAGTTTGATCCCGAGTTTCACTTTCTCCACAGAGATGGAAATCTATATAATATTCACTTCACATATAATAGGATCAATATGAGAAGGTTATATCAAGCGGTTGAAGCAGCAGAAAGCTTGGGATCCGAGTTTCTATTTCCATCTGCTTCATCTAGAAGGAGGTGCATCAAAACCAATGATTTGGTTCCCATATCTGGTACTTTAAATGAGGAGCAGGCGTGTTCGATCAAGATGATTCTTGGTAGCAAAGGCGCACCGCCATATCTAATTCATGGCCCTCCAGGTACAGGCAAGACCAGGACAATAGTAGAAGCAGTCCTCCAGCTCTACAAGCATCATAGGAATGCACGTGTTCTTATCTGCGCACCTTCGAATAGTGCAGCAGACTACATACTGGAGCGACTCCTTGCGCAACAGGCTGTTGAATTTCGAGAAAATGAAATATTCAGGCTCAATGCATCTACCAGGCCATATGAGGATCTCAAACCCGAGCTGATCCGCTTCTGCTTCTTTGATGATTTGATATTTAAGTGCCCCCCATTCAATGCCCTTATGCATTACAAGATTGTAATATCCACATATATGAGTGCCTCTCTTCTGTATGCAGAAGATGTTGCCCGAGGTCACTTTTCTCACATTTTCTTGGATGAGGCTGGCCAAGCTTCAGAACCGGAAACCATGATACCTATTTCCCATCTCTGCAGAAGGGAGACTGTTGTTGTTCTAGCTGGAGACCCGATGCAGTTGGGTCCTGTAGTATTTTCCAAAAATGCAGAACAGTTTGGATTGGGGAAATCATACATGGAACGGTTGTTTGAATGCGATTTGTATGACAGTGAAGATGCAAATTATGTAACAACATTGCTTAGAAACTATCGATGTCACCCAGAGATTTTATATCTCCCTTCAAAGCTGTTCTATAATGGAGAATTGATTGCATGTAGAGATCAAACAACTTTCACAGTGAGTGAAGACCTCATTCCTAATAAGGAATTCCCTATTCTCTTTTTTGGCATCCAAGGATGTGATGAAAGAGAAGGGAATAACCCATCATGGTTCAACCGAGTCGAAGCAAGTAAGGTTGTAGAAGTAGTGAAGAGGCTGATAGCTGGTGGGAATATAAGGGATGAAGACATTGGCATTATAACACCATACAGGCAGCAAGTGCTCAAGATTAAACAGACACTTGAAATTCTAGATATGCCTGATATCAAAGTTGGTAGTGTTGAGCAATTTCAAGGTCAGGAGAAGGAGGTTATTATTGTATCAACTGTTCGGTCAACCATCAAACACAATGACTTTGACAGAGTCCACTGTCTTGGCTTTTTGAGCAATCATAGAAGGTTTAATGTGGCTGTAACCCGTGCGATCTCAATGCTGGTTATAATTGGGAATCCACATATTATCTGCAAGGATGATCGTTGGAGCCAAATGTTGTGGCATTGCGTGGAAAATTCATCTTATCAGGGTTGTACTCTTCCAGAAAGGCTGGAGACTTGTGATAACAGGAACAAAGGAAAGAATGCATTACCCTCTGGAAATGTAGAATGGAGTCAAGATAATGCATTACCTTCTGAAAATGTAGGTTGGGGTCAAGATGATAATGTGGAATGGGGTACAGATAATGCATTACCTTCGGAAAATGTCGGTTGTGGTCAGGATGATAATGTAGAACGGGGTAAAGATAATGCATTACCTTCTGAAAATGCTAGATGGGGGAAAGATGAAAATGTTGGATGGGGTCAAGATGATAATGTAGAATGGGGTCAAGACTCATCCCAGTTTGAGATCCATAAACCTGTTACAGATGAAGCTGAATGGTCTGATGGGTGGAAGAATTAA 2838 0.4109 MSTAGDWSDEERSVIGGKAEIGFLDFEEEKSFYSYADNEEEPIIISAPFALVDGKPQSVFVGHTAVDLITIKNTTSEPVTLWSVHIFASNPADSFTLSLMEPPSANSNSEICAVQSFLESFTLEDRMLQPGQTLKVWLSCKTKDMGMYSSVLNFDLGDKVIERVAFLLVEDKISKSLTAKRPYSKGRRKDKFVVENVVPGFRPLGKANRKYINRLPKYQIPSDVRDLLESKQIPQVVEEGLRKGRYAAYFKTLIIMEEIQLEEDMRTYDMDSVTMRKKSNQFLSMEVPGLAERRPSLVHGDYIFAKIASEHDNNNKSYQGFIHRVEADEIYLKFDPEFHFLHRDGNLYNIHFTYNRINMRRLYQAVEAAESLGSEFLFPSASSRRRCIKTNDLVPISGTLNEEQACSIKMILGSKGAPPYLIHGPPGTGKTRTIVEAVLQLYKHHRNARVLICAPSNSAADYILERLLAQQAVEFRENEIFRLNASTRPYEDLKPELIRFCFFDDLIFKCPPFNALMHYKIVISTYMSASLLYAEDVARGHFSHIFLDEAGQASEPETMIPISHLCRRETVVVLAGDPMQLGPVVFSKNAEQFGLGKSYMERLFECDLYDSEDANYVTTLLRNYRCHPEILYLPSKLFYNGELIACRDQTTFTVSEDLIPNKEFPILFFGIQGCDEREGNNPSWFNRVEASKVVEVVKRLIAGGNIRDEDIGIITPYRQQVLKIKQTLEILDMPDIKVGSVEQFQGQEKEVIIVSTVRSTIKHNDFDRVHCLGFLSNHRRFNVAVTRAISMLVIIGNPHIICKDDRWSQMLWHCVENSSYQGCTLPERLETCDNRNKGKNALPSGNVEWSQDNALPSENVGWGQDDNVEWGTDNALPSENVGCGQDDNVERGKDNALPSENARWGKDENVGWGQDDNVEWGQDSSQFEIHKPVTDEAEWSDGWKN 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0022 945 MobiDBLite consensus disorder prediction 929 945 - -
Lal15g0022 945 MobiDBLite consensus disorder prediction 886 901 - -
Lal15g0022 945 CDD SF1_C_Upf1 626 814 IPR041679 -
Lal15g0022 945 Gene3D - 354 490 IPR027417 -
Lal15g0022 945 Gene3D - 512 610 IPR027417 -
Lal15g0022 945 Gene3D - 298 353 - -
Lal15g0022 945 PANTHER RNA HELICASE SDE3-RELATED 6 834 - -
Lal15g0022 945 Pfam AAA domain 596 798 IPR041679 -
Lal15g0022 945 MobiDBLite consensus disorder prediction 873 945 - -
Lal15g0022 945 PANTHER DNA2/NAM7 HELICASE FAMILY 6 834 IPR045055 -
Lal15g0022 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 811 IPR027417 -
Lal15g0022 945 Pfam AAA domain 400 491 IPR041677 GO:0004386
Lal15g0022 945 Pfam AAA domain 517 588 IPR041677 GO:0004386
Lal15g0022 945 CDD DEXXQc_Helz-like 400 625 - -
Lal15g0022 945 Gene3D - 625 826 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0022 Lal-Chr15 194319 202306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0022 399 556 Core DNA Replication Machinery Family AT1G08840 31.056 2.67e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0022 K18422 - gmx:100801796 1387.47