Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0018 ATGGATTCAGAAGGTCTTAATTCAAATATGAAAGATGGAGGAAACAAAAGCAGTAAAGATATGATTTTTAGAGCTGATAAAATTGATCTGAAGAGTTTGGATGCCCAGCTTGAAAAACACTTAAGCCGGGTTTGGTCGAGAAGCAACAATGATACAAAAAGGCCTAAAGAGGTTTGGGAGATTGATTTGGCCAAATTGGATTTACTATATGTCGTAGCTAACGGAGCATATGGCATTGTTTATAGGGGCACATATGATAGCCAAGATGTCGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTGCTACTTCTGCCGAAACTACTGCTCTACGAGCATCTTTTAAGCAAGAGGTTGCTGTCTGGCACAAACTTGACCACCCAAATGTCACAAAATTTGTGGGAGCTTCAATGGGCACTTCAAATCTTAAGATTCCTTTACAAAACCCATTGAACGGTGCTCAAGATTCTCTTCCTTCTAGGGCATGTTGTGTTGTTGTTGAGTTTGTCCCTGGTGGCACATTAAAACAATACTTGATAAGAAATAGGCGGAAGAAACTTGCTTATAAAATTGTGATTCGGATAGCTTTGGACCTCTCCAGGGGTCTTAGCTATCTACATTCAAAGAAGATTGTTCATCGTGATGTGAAGACAGAGAATATGCTCCTGGATGGTAATCAGAATCTGAAAATAGCTGATTTTGGAGTTGCTCGTGTTGAAGCTGTGAATCCAAGTGACATGACTGGTGAAACTGGAACACTTGGATATATGGCACCTGAGGTTCTGGATGGTAAACCTTATAACAGGAGGTGTGATGTGTATAGTTTTGGCATTTGCTTGTGGGAGATTTATTGTTGTGATATGCCTTATCCATTTCTAAGCTTTGCCGATGTGTCATCTGCAGTTGTTCATCAGAATTTACGACCAGAAATTCCTAGGTGTTGTCCAAGTGGGTTGGTGAATATAATGAGGAAATGTTGGGATGGGAATCCAGATAAACGTCCAGAAATGGAGGAGGTGGTGAGAATGCTGGAAGCACTTGATACAAGCAAAGGTGGTGGAATGATACCAGAAGATCAGCCTAAAGGTTGCTTCTGTTTTGCCCCAACCCGCGGTCCTTAA 1122 0.4162 MDSEGLNSNMKDGGNKSSKDMIFRADKIDLKSLDAQLEKHLSRVWSRSNNDTKRPKEVWEIDLAKLDLLYVVANGAYGIVYRGTYDSQDVAVKVLDWGEDGVATSAETTALRASFKQEVAVWHKLDHPNVTKFVGASMGTSNLKIPLQNPLNGAQDSLPSRACCVVVEFVPGGTLKQYLIRNRRKKLAYKIVIRIALDLSRGLSYLHSKKIVHRDVKTENMLLDGNQNLKIADFGVARVEAVNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPFLSFADVSSAVVHQNLRPEIPRCCPSGLVNIMRKCWDGNPDKRPEMEEVVRMLEALDTSKGGGMIPEDQPKGCFCFAPTRGP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0018 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lal15g0018 373 Pfam Protein tyrosine and serine/threonine kinase 70 344 IPR001245 GO:0004672|GO:0006468
Lal15g0018 373 SMART serkin_6 66 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0018 373 SUPERFAMILY Protein kinase-like (PK-like) 43 344 IPR011009 -
Lal15g0018 373 ProSiteProfiles Protein kinase domain profile. 66 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0018 373 Gene3D Transferase(Phosphotransferase) domain 1 172 355 - -
Lal15g0018 373 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 366 - -
Lal15g0018 373 PIRSF ILK 30 353 - -
Lal15g0018 373 PRINTS Tyrosine kinase catalytic domain signature 167 180 IPR001245 GO:0004672|GO:0006468
Lal15g0018 373 PRINTS Tyrosine kinase catalytic domain signature 205 223 IPR001245 GO:0004672|GO:0006468
Lal15g0018 373 PRINTS Tyrosine kinase catalytic domain signature 271 293 IPR001245 GO:0004672|GO:0006468
Lal15g0018 373 PRINTS Tyrosine kinase catalytic domain signature 315 337 IPR001245 GO:0004672|GO:0006468
Lal15g0018 373 Gene3D Phosphorylase Kinase; domain 1 55 148 - -
Lal15g0018 373 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 8 366 - -
Lal15g0018 373 CDD STKc_MAP3K-like 75 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0018 Lal-Chr15 182359 185052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0018 14 373 MAP Kinase Kinase Kinase AT3G22750 79.444 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal15g0018 PK_Tyr_Ser-Thr 4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0018 - - gmx:100803917 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0033 16 217871 222266 Lal15g0018 15 182359 185052 LSH