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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal14g1987
ATGATGTCGATTTTGTTACCTCAAACTCACAACGTAACCAATATGGTCCCTTCAACACAACTCCTCTTGCTATCATGCTTCTTATTACAATTTGCATCAACCTTTGTTAACTCCTCCTATTCAACACAAAATTACTACTATGTCCCAGAGAGTCCTAAGAAAGCATTGCTCAATGAGATAGATTCTTGTTGGAAGGCAAAATCAAATTGGGCATCAAATCGGCAAGCCTTGGCTGATTGTGCAATTGGATTTGGCAAATATGCAATTGGAGGAAAATATGGTGCAATATATAGAGTCACAGATTCCTCTGATGACCCTATAAACCCAAAACCAGGGACACTTCGTTATGGTGTAATCCAAACACAACCCCTTTGGATAACATTCAGCAAGGACATGGTTATTACATTAGAAAATGAGCTTATAATGAACAGTTATAAGACCATTGATGGGAGAGGAGTTAAAGTGGAGATTTCAAATGGGCCATGCATTACAATACAATATGTTAGTTATGTTATAATACATGGTATTAGCATCCATGATTGTAAACCAGGCAAGAGTGGCCTTGTTAGAAGTACTCCTGAGCATGTTGGTCATCGTCACGGCTCTGATGGAGATGCAATTAGTATATTTTCTTCCTCAAATGTTTGGATTGATCATTGCTATTTTGCTAGTTGCACTGATGGCCTCATTGATATTATTCATGCCTCAACTGCCATTACCATTTCTAACAATTACTTCACCAACCATGACAAAGTTATGCTGCTAGGACACAACGACCAATACACAGCAGATAAAATAATGAAAGTAACAATAGTCTTCAACCATTTTGCTACTGGGCTAATTGAAAGGATGCCAAGGGTAAGATTTGGTTATGCGCATGTGGTGAACAACAAATATGATGAGTGGAAAATGTATGCTATGGGGGGAAGTGCTAACCCAACCATCTTCAGTGAAAGCAACTTCTTTATAGCATCCAATAACCAATTTGCAAAACAGGTTACAAAGAGGGAAGCGAAGAAGAAGTGGAAGAGTTGGAAATGGAGATCATCAAAGGATATATTCCAAAATGGTGCTTATTTTGTACCATCAGGCTATGGAAGTTGTGCACCTAATTACTCACGTGCTCAATCTTTTACTGCTGCACCAGCCTTCACGGTCCCAGCAATCACTCTCAATGCGGGTCCTTTGACTTGTGTTGTTGGTAGAGCATGTTAA
1215
0.3918
MMSILLPQTHNVTNMVPSTQLLLLSCFLLQFASTFVNSSYSTQNYYYVPESPKKALLNEIDSCWKAKSNWASNRQALADCAIGFGKYAIGGKYGAIYRVTDSSDDPINPKPGTLRYGVIQTQPLWITFSKDMVITLENELIMNSYKTIDGRGVKVEISNGPCITIQYVSYVIIHGISIHDCKPGKSGLVRSTPEHVGHRHGSDGDAISIFSSSNVWIDHCYFASCTDGLIDIIHASTAITISNNYFTNHDKVMLLGHNDQYTADKIMKVTIVFNHFATGLIERMPRVRFGYAHVVNNKYDEWKMYAMGGSANPTIFSESNFFIASNNQFAKQVTKREAKKKWKSWKWRSSKDIFQNGAYFVPSGYGSCAPNYSRAQSFTAAPAFTVPAITLNAGPLTCVVGRAC
404
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal14g1987
404
Gene3D
-
57
397
IPR012334
-
Lal14g1987
404
PANTHER
PECTATE LYASE
15
403
-
-
Lal14g1987
404
SUPERFAMILY
Pectin lyase-like
58
395
IPR011050
-
Lal14g1987
404
Pfam
Pectate lyase
142
322
IPR002022
-
Lal14g1987
404
PRINTS
Pollen allergen Amb family signature
80
97
IPR018082
-
Lal14g1987
404
PRINTS
Pollen allergen Amb family signature
103
128
IPR018082
-
Lal14g1987
404
PRINTS
Pollen allergen Amb family signature
139
155
IPR018082
-
Lal14g1987
404
PRINTS
Pollen allergen Amb family signature
203
224
IPR018082
-
Lal14g1987
404
PRINTS
Pollen allergen Amb family signature
283
302
IPR018082
-
Lal14g1987
404
PRINTS
Pollen allergen Amb family signature
305
324
IPR018082
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal14g1987
Lal-Chr14
18851293
18859687
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal14g1987
21
404
Polysaccharide Lyase
AT1G11920
67.273
0.0
553
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal14g1987
K01728
-
gmx:100807483
645.58
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