Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1971 ATGAATATTAGTATATCTTTGTCATCAGCTGCGTGCAAGCCCCTAGTGAATTTTCAACCGGCACTTACCACCACGGAGTCCTTGTTATTTCAGCATCATCAGAAACAACGTAAGGACAAGGTGGTAGTTATCATGGGCGCCACCGGCACCGGCAAGTCTAAGTTAGCCATAGACCTAGCCACTCATTTCCCACCGGCAGAGATAGTCAACTCTGACAAGATGCAAGTTTACAAAGGTCTTGATATCACCACTAACAAGGTCACTGAAGAAGAATGTCGTGGAGTCCCACATCATCTCCTAAGCATTGTTGCTAATCCTAACTACAATTTCACTGCCAATGATTTTTGCCACCATGCCTCTCTGGCCATTGACTCCATTGTAGACAGAGATGGCTTGCCCATCATTGCTGGTGGATCCAACTCCTTCATTGATGCTTTGGTGAACCACGATTCGACGTTTCGATTAAGGTATGAATGTTGTTTCCTATGGGTGGACGTGTCACTTCCCGTTCTCCATTCATCTCTCTCAGCAAGAGTAGATCGGATGATAGAAGCTGGACAGATTAATGAAATTCGTGAATTTTTCGATCATTCTATTAGTGACTACACAAGAGGAGTTAGAAGGGCTATAGGGGTCCCAGAATTTGATGAATTTTTAAGAGAAGAAGCCAGAGGTGGTGATGAAAGGATAAAGAAGAAGCTTCTGGAAGTTGCCATTGCTATGACAAAAGTGAATAACTGCAAGCTAGCCAACCGCCAAGTGCAAAAGATCCACCACCTTTACAAAATTTGGAAAAAGAACATGCATAGGCTAAACGCCACTGAGTCTGTATTCAATAAAAGCGCATGGGAGGATGACGTGGCGGCAAAGGGTCGTAGGATCGTGCAAAAGTTTCTATACGATGATACTCCAGCTTTATTTTCTGCCGGTGTGCCGCTGCCGTCGCTTCCACCAACTATGGCAGCGGTAACACATTGA 978 0.4468 MNISISLSSAACKPLVNFQPALTTTESLLFQHHQKQRKDKVVVIMGATGTGKSKLAIDLATHFPPAEIVNSDKMQVYKGLDITTNKVTEEECRGVPHHLLSIVANPNYNFTANDFCHHASLAIDSIVDRDGLPIIAGGSNSFIDALVNHDSTFRLRYECCFLWVDVSLPVLHSSLSARVDRMIEAGQINEIREFFDHSISDYTRGVRRAIGVPEFDEFLREEARGGDERIKKKLLEVAIAMTKVNNCKLANRQVQKIHHLYKIWKKNMHRLNATESVFNKSAWEDDVAAKGRRIVQKFLYDDTPALFSAGVPLPSLPPTMAAVTH 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1971 325 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 30 303 - -
Lal14g1971 325 Pfam IPP transferase 155 255 - -
Lal14g1971 325 Pfam IPP transferase 75 148 - -
Lal14g1971 325 Gene3D - 38 299 IPR027417 -
Lal14g1971 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 202 IPR027417 -
Lal14g1971 325 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 168 268 - -
Lal14g1971 325 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 30 303 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1971 Lal-Chr14 18769809 18771950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1971 156 305 C2H2 Transcription Factor Family AT2G27760 29.213 5.31e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1971 K10760 - gmx:100778430 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1971 14 18769809 18771950 Lal14g1971 14 18769809 18771950 ECH
Lal14g1971 14 18769809 18771950 Lal19g1524 19 17536270 17539934 LSH
Lal14g1971 14 18769809 18771950 Lal11g0462 11 3563215 3565763 PCT
Lal11g0462 11 3563215 3565763 Lal14g1971 14 18769809 18771950 PCT